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SCN18_10_11_15_R5_B_scaffold_160_17

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(19433..20176)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 247.0
  • Bit_score: 398
  • Evalue 5.50e-108
rsuA; 16S rRNA pseudouridylate 516 synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 238.0
  • Bit_score: 361
  • Evalue 1.50e-97
Pseudouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSP4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 245.0
  • Bit_score: 384
  • Evalue 7.70e-104

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Taxonomy

Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6 → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAGCAAGCCGACGCCCACCCTCCGGCTCGACCGGCTCCTGGCCAATCTCGGCTATGGCTCGCGCCGCGAGGTGCAGGGCTTCGTCGATGCCGGGCTGGTGACGCTGGACGGCGTGGCGATCGAGGATGCCGACCAGCGCATCGCGGTGACGCCGGACCTGTCGCAGCGCATGGTGGTGCGCGGCCGGCCGCTCGATCCGCCGCCCGGCGTGGTGCTGATGCTCCACAAGCCGCTCGGCGTCACCTGCTCGCACAAGGAAGTGGGACCCTTGGTCTATTCGCTGCTGCCCGATCGGTGGCGCAGGCGCGATCCGGCGATCTCGACCGTCGGCCGGCTGGACAAGGAAACCTCGGGGCTGCTGCTCCTGACCGATGATGGCGCCCTGCTGCACCGCATCATCTCGCCGAAAAACCACGTGCCCAAGCGCTATCGGGTCACGCTCGACCGGCCCTTGCGCGGCGACGAGGCGGCACGCTTCGCCGCCGGCACGCTGCTGCTGGAAGGCGAGGAGAAACCGCTTCTGCCGGCCGAGATGGAGACCCTGTCGCCGACCAGCGCGGTCGTGACCCTGCATGAGGGCCGCTACCACCAGGTCAGGCGCATGTTCGCCGCCGTCGGCAATCACGTCCAGGCGCTGCACCGGGACTGCATGGGGCGGCTGGCGCTGCCCGACGACCTGGAGCCCGGCCGCTATCGCATTCTCGGCGAGGCGGAGATCGCCGCCGTGCTGCCGGAGCGCTAG
PROTEIN sequence
Length: 248
MSKPTPTLRLDRLLANLGYGSRREVQGFVDAGLVTLDGVAIEDADQRIAVTPDLSQRMVVRGRPLDPPPGVVLMLHKPLGVTCSHKEVGPLVYSLLPDRWRRRDPAISTVGRLDKETSGLLLLTDDGALLHRIISPKNHVPKRYRVTLDRPLRGDEAARFAAGTLLLEGEEKPLLPAEMETLSPTSAVVTLHEGRYHQVRRMFAAVGNHVQALHRDCMGRLALPDDLEPGRYRILGEAEIAAVLPER*