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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 401-445 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_9076
Class: Alphaproteobacteria (66.67%)
3 1961 bp 63.74 17.82 91.64
SCN18_26_2_15_R5_B_scaffold_5427
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (66.67%)
3 3137 bp 66.27 24.43 99.94
SCN18_26_2_15_R5_B_scaffold_8970
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (66.67%)
3 1981 bp 62.34 24.38 82.84
SCN18_26_2_15_R5_B_scaffold_5701
Order: Rhizobiales (66.67%)
3 3003 bp 65.00 29.12 84.52
SCN18_26_2_15_R5_B_scaffold_7349
Class: Alphaproteobacteria (66.67%)
3 2374 bp 66.68 21.23 98.44
SCN18_26_2_15_R5_B_scaffold_9127
Class: Alphaproteobacteria (66.67%)
3 1949 bp 65.11 25.94 95.13
SCN18_26_2_15_R5_B_scaffold_5998
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (66.67%)
3 2875 bp 64.28 20.71 67.83
SCN18_26_2_15_R5_B_scaffold_11528
Class: Alphaproteobacteria (66.67%)
3 1583 bp 61.02 20.18 46.43
SCN18_26_2_15_R5_B_scaffold_7893
Order: Sphingomonadales (66.67%)
3 2228 bp 68.04 23.03 91.70
SCN18_26_2_15_R5_B_scaffold_11281
Class: Alphaproteobacteria (66.67%)
3 1615 bp 66.81 14.86 93.07
SCN18_26_2_15_R5_B_scaffold_4873
Class: Alphaproteobacteria (66.67%)
3 3412 bp 60.79 16.57 68.14
SCN18_26_2_15_R5_B_scaffold_7386
Order: Rhizobiales (66.67%)
3 2364 bp 66.03 24.81 90.99
SCN18_26_2_15_R5_B_scaffold_8791
Class: Alphaproteobacteria (66.67%)
3 2017 bp 64.80 27.07 82.85
SCN18_26_2_15_R5_B_scaffold_5768
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (66.67%)
3 2967 bp 66.57 26.74 78.97
SCN18_26_2_15_R5_B_scaffold_3869
Species: SCNPILOT_EXPT_1000_BF_Afipia_62_8 (50%)
2 4115 bp 67.31 27.19 100.02
SCN18_26_2_15_R5_B_scaffold_11561
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (50%)
2 1578 bp 69.20 21.48 99.05
SCN18_26_2_15_R5_B_scaffold_7935
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 2216 bp 67.06 25.25 94.90
SCN18_26_2_15_R5_B_scaffold_11597
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 1573 bp 67.96 19.07 80.29
SCN18_26_2_15_R5_B_scaffold_11599
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (50%)
2 1573 bp 65.10 36.71 99.17
SCN18_26_2_15_R5_B_scaffold_7452
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (100%)
2 2346 bp 69.61 13.17 99.36
SCN18_26_2_15_R5_B_scaffold_6842
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (50%)
2 2547 bp 66.67 23.44 92.23
SCN18_26_2_15_R5_B_scaffold_10660
Species: SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 (100%)
2 1696 bp 69.69 22.82 94.63
SCN18_26_2_15_R5_B_scaffold_9002
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 (50%)
2 1975 bp 69.32 18.68 99.19
SCN18_26_2_15_R5_B_scaffold_9014
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (50%)
2 1973 bp 69.99 21.06 100.20
SCN18_26_2_15_R5_B_scaffold_11915
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 1535 bp 66.38 19.35 99.09
SCN18_26_2_15_R5_B_scaffold_7001
Species: GWB2_Desulfobacterales_56_26_curated (50%)
2 2504 bp 65.46 24.98 99.20
SCN18_26_2_15_R5_B_scaffold_10186
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (50%)
2 1764 bp 68.14 15.90 93.03
SCN18_26_2_15_R5_B_scaffold_7775
Species: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 (50%)
2 2258 bp 68.29 25.04 90.21
SCN18_26_2_15_R5_B_scaffold_8657
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 2043 bp 65.35 17.25 99.56
SCN18_26_2_15_R5_B_scaffold_11679
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
2 1563 bp 70.12 12.28 100.00
SCN18_26_2_15_R5_B_scaffold_9047
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (50%)
2 1967 bp 67.92 11.06 93.65
SCN18_26_2_15_R5_B_scaffold_6172
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2798 bp 62.22 26.64 78.27
SCN18_26_2_15_R5_B_scaffold_4285
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (100%)
2 3758 bp 70.12 26.82 99.87
SCN18_26_2_15_R5_B_scaffold_8212
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 2144 bp 65.39 17.21 88.57
SCN18_26_2_15_R5_B_scaffold_10274
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (50%)
2 1752 bp 64.50 15.41 99.83
SCN18_26_2_15_R5_B_scaffold_8487
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2077 bp 67.40 26.36 93.31
SCN18_26_2_15_R5_B_scaffold_11255
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (50%)
2 1618 bp 67.61 20.58 94.75
SCN18_26_2_15_R5_B_scaffold_10301
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (50%)
2 1747 bp 69.49 18.89 93.76
SCN18_26_2_15_R5_B_scaffold_6505
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 2664 bp 66.67 24.16 90.88
SCN18_26_2_15_R5_B_scaffold_11038
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial (50%)
2 1646 bp 69.81 23.88 100.06
SCN18_26_2_15_R5_B_scaffold_3350
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (100%)
2 4654 bp 69.64 30.04 100.04
SCN18_26_2_15_R5_B_scaffold_11832
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1544 bp 65.80 13.70 86.85
SCN18_26_2_15_R5_B_scaffold_4458
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
1 3652 bp 66.07 32.69 99.97
SCN18_26_2_15_R5_B_scaffold_6938
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (100%)
1 2521 bp 68.23 22.85 91.75
SCN18_26_2_15_R5_B_scaffold_2957
Species: SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 (100%)
1 5167 bp 67.33 26.68 99.98
Displaying items 401-445 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.