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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 51-100 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_548
Class: Alphaproteobacteria (59.26%)
27 26136 bp 63.50 21.49 86.44
SCN18_26_2_15_R5_B_scaffold_2983
Order: Rhizobiales (57.14%)
7 5132 bp 68.10 13.56 86.63
SCN18_26_2_15_R5_B_scaffold_4844
Order: Rhizobiales (60%)
5 3421 bp 62.88 24.33 86.64
SCN18_26_2_15_R5_B_scaffold_1314
Class: Alphaproteobacteria (54.55%)
11 10480 bp 66.22 24.06 86.68
SCN18_26_2_15_R5_B_scaffold_5329
Order: Rhizobiales (50%)
4 3185 bp 65.27 18.51 86.75
SCN18_26_2_15_R5_B_scaffold_3581
Order: Rhizobiales (50%)
4 4408 bp 66.74 22.22 86.77
SCN18_26_2_15_R5_B_scaffold_551
Class: Alphaproteobacteria (50%)
26 26015 bp 64.70 27.23 86.82
SCN18_26_2_15_R5_B_scaffold_11832
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1544 bp 65.80 13.70 86.85
SCN18_26_2_15_R5_B_scaffold_452
Class: Alphaproteobacteria (50%)
28 32381 bp 66.38 26.48 87.06
SCN18_26_2_15_R5_B_scaffold_713
Class: Alphaproteobacteria (60.87%)
23 19978 bp 63.85 19.31 87.10
SCN18_26_2_15_R5_B_scaffold_2541
Class: Alphaproteobacteria (77.78%)
9 5819 bp 66.13 25.80 87.23
SCN18_26_2_15_R5_B_scaffold_484
Class: Alphaproteobacteria (65.71%)
35 29990 bp 62.98 22.43 87.32
SCN18_26_2_15_R5_B_scaffold_8860
Class: Alphaproteobacteria (100%)
3 2004 bp 64.22 25.97 88.32
SCN18_26_2_15_R5_B_scaffold_1946
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
9 7424 bp 63.95 28.21 88.34
SCN18_26_2_15_R5_B_scaffold_2297
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
6 6406 bp 67.45 25.08 88.37
SCN18_26_2_15_R5_B_scaffold_2271
Class: Alphaproteobacteria (80%)
10 9406 bp 66.87 25.50 88.38
SCN18_26_2_15_R5_B_scaffold_1038
Class: Alphaproteobacteria (78.57%)
14 13274 bp 66.18 25.98 88.44
SCN18_26_2_15_R5_B_scaffold_107
Class: Alphaproteobacteria (61.65%)
133 136923 bp 63.60 29.03 88.54
SCN18_26_2_15_R5_B_scaffold_8212
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 2144 bp 65.39 17.21 88.57
SCN18_26_2_15_R5_B_scaffold_516
Phylum: Proteobacteria (73.08%)
26 27890 bp 65.01 27.36 88.72
SCN18_26_2_15_R5_B_scaffold_1691
Class: Alphaproteobacteria (66.67%)
9 8294 bp 66.78 26.71 88.73
SCN18_26_2_15_R5_B_scaffold_1219
Order: Rhizobiales (60%)
10 11369 bp 65.76 27.73 88.74
SCN18_26_2_15_R5_B_scaffold_874
Species: SCNPILOT_SOLID2_TRIM150_Afipia_61_20 (53.33%)
15 15876 bp 66.19 27.04 88.76
SCN18_26_2_15_R5_B_scaffold_1358
Phylum: Proteobacteria (60%)
10 10125 bp 65.51 24.71 88.86
SCN18_26_2_15_R5_B_scaffold_4890
Order: Rhodospirillales (50%)
4 3403 bp 67.18 25.52 88.86
SCN18_26_2_15_R5_B_scaffold_4568
Class: Alphaproteobacteria (60%)
5 3581 bp 67.69 22.41 88.89
SCN18_26_2_15_R5_B_scaffold_2029
Phylum: Proteobacteria (71.43%)
7 7171 bp 69.14 22.53 88.94
SCN18_26_2_15_R5_B_scaffold_777
Class: Alphaproteobacteria (64.71%)
17 18370 bp 64.90 23.29 88.97
SCN18_26_2_15_R5_B_scaffold_4717
Order: Rhizobiales (50%)
4 3492 bp 67.41 18.30 89.00
SCN18_26_2_15_R5_B_scaffold_565
Class: Alphaproteobacteria (83.33%)
24 25310 bp 66.74 26.79 89.12
SCN18_26_2_15_R5_B_scaffold_593
Order: Rhodospirillales (50%)
26 23995 bp 66.11 26.67 89.16
SCN18_26_2_15_R5_B_scaffold_775
Class: Alphaproteobacteria (72.22%)
18 18412 bp 67.35 25.64 89.18
SCN18_26_2_15_R5_B_scaffold_706
Phylum: Proteobacteria (64.71%)
17 20082 bp 65.89 25.21 89.18
SCN18_26_2_15_R5_B_scaffold_655
Order: Rhizobiales (55%)
20 21508 bp 66.66 26.75 89.21
SCN18_26_2_15_R5_B_scaffold_1660
Phylum: Proteobacteria (63.64%)
11 8442 bp 64.30 25.37 89.30
SCN18_26_2_15_R5_B_scaffold_1037
Class: Alphaproteobacteria (64.29%)
14 13277 bp 66.12 25.78 89.39
SCN18_26_2_15_R5_B_scaffold_2622
Order: Rhizobiales (50%)
6 5684 bp 65.31 26.68 89.51
SCN18_26_2_15_R5_B_scaffold_739
Phylum: Proteobacteria (68.18%)
22 19277 bp 67.40 25.92 89.53
SCN18_26_2_15_R5_B_scaffold_624
Class: Alphaproteobacteria (82.61%)
23 22637 bp 66.78 26.41 89.53
SCN18_26_2_15_R5_B_scaffold_2015
Class: Alphaproteobacteria (100%)
5 7207 bp 66.32 28.85 89.54
SCN18_26_2_15_R5_B_scaffold_4676
Class: Alphaproteobacteria (71.43%)
7 3518 bp 68.93 25.16 89.54
SCN18_26_2_15_R5_B_scaffold_2491
Class: Alphaproteobacteria (55.56%)
9 5940 bp 66.70 26.01 89.65
SCN18_26_2_15_R5_B_scaffold_229
Class: Alphaproteobacteria (52.54%)
59 62825 bp 64.92 27.52 89.68
SCN18_26_2_15_R5_B_scaffold_435
Class: Alphaproteobacteria (68.42%)
38 33845 bp 66.64 27.19 89.69
SCN18_26_2_15_R5_B_scaffold_2564
Class: Alphaproteobacteria (57.14%)
7 5779 bp 65.13 24.55 89.70
SCN18_26_2_15_R5_B_scaffold_643
Class: Alphaproteobacteria (66.67%)
24 21815 bp 65.34 26.80 89.70
SCN18_26_2_15_R5_B_scaffold_3302
Phylum: Proteobacteria (50%)
4 4712 bp 66.17 27.09 89.77
SCN18_26_2_15_R5_B_scaffold_2301
Class: Alphaproteobacteria (71.43%)
7 6396 bp 65.99 20.40 89.77
SCN18_26_2_15_R5_B_scaffold_566
Class: Alphaproteobacteria (61.54%)
26 25270 bp 66.03 26.24 89.79
SCN18_26_2_15_R5_B_scaffold_2873
Order: Rhodospirillales (100%)
5 5279 bp 68.35 21.06 89.85
Displaying items 51-100 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.