ggKbase home page

SCN18_31_3_15_R1_B_scaffold_225_19

Organism: SCN18_31_3_15_R1_B_Nitrobacter_62_136

near complete RP 50 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 20216..21331

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELM3_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 366.0
  • Bit_score: 434
  • Evalue 7.50e-119
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 366.0
  • Bit_score: 434
  • Evalue 2.10e-119
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACK50017.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 366.0
  • Bit_score: 434
  • Evalue 1.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGTCCTCGTCAGTTCACCCCGGCATGGTTGCCCGAAGCCGATCCTGCCTGTTGCTTGCGGTTGCTCCGCTGCTCGTAGTCATGCTGTCCGGCTGCGAGCGCGAGGTCGCCAAGGAAGCGCCGCCGCCGCGTCACGTCCGCACCGTGGTCGCCGAAAAGGGTGGTCTAGGCGAATCCATCGTCTTGACCGGACAGCTTCAGGCGGAAAAGGAAGTCGCGCTCGCCTTTCGTATCGGCGGCCGGATCATCGAGCGCCTGGTGGATACGGGCGATCGCGTCACGCCGGATCAGTTGGTGGCCAAGCTCGATCCGCAGAACGAATTGAACTCGCTTCGCTCCGCGCGCGCCGCGCTCGCGGCCGCCAACGCCCGGCTGGAGCAGGATTCCAATCATTTCGACCGGCAGGAGACATTGCTGCGGCAGGGCTGGACCACCCGCGCCAATTTCGATCAGGCCCAGCAAGCCCTGCGCACCGCGCAGGCGGCAGTGGATAATGCCAAGGCCCAGGCTGAAATCGCCGAGGACCGCGTCAGCTACACTGAACTCAGGGCGGGCGTGACCGGCACGATCACTCGCCGCGCGGCGGAATCGGGCGAGGTAGTGCAGGCCGGGCAGACGATCTTCACGGTTGCGCGCGATGCCGGCTGGGACGCTGTGTTCGACGTTTCGGCTCAGGTGTTGCGTACGGCGCCGGGCGACGCCGATGTGACCATTGCTCTGACCGACGATCCAAGCGTGACCGCCAAGGGTCGGGTGCGGCAGATCGATCCGCAGGCCGACCCGGTCACGCGCACGTTCAAGGTCCGCGTGGCGGTCAATGATCCGCCGCCGGCCATGCGGCTCGGCGCAACCGTGACGGGCCGGGTGGACGTCGACCATGGCCACGGAATTTCACTGCCTGCGAGCGCCTTGACGGCCACGGACAAAAGGCCGGCGGTTTGGGTGGTCGATCCGAACAGCCTGACCGTCAGTCTCAAGCCTGTCGAGGTTGCGCGCTTTGATCCCGGGACAGTGGTGCTTTCGGGGGGACTCGACGGCGGCGAGATCGTCGTCACCGCCGGCGTTCAGGCGCTGGTTCCGGGCCAGAAGGTCCGCCTTGAGGGCGCGCGGTCATGA
PROTEIN sequence
Length: 372
MSSSVHPGMVARSRSCLLLAVAPLLVVMLSGCEREVAKEAPPPRHVRTVVAEKGGLGESIVLTGQLQAEKEVALAFRIGGRIIERLVDTGDRVTPDQLVAKLDPQNELNSLRSARAALAAANARLEQDSNHFDRQETLLRQGWTTRANFDQAQQALRTAQAAVDNAKAQAEIAEDRVSYTELRAGVTGTITRRAAESGEVVQAGQTIFTVARDAGWDAVFDVSAQVLRTAPGDADVTIALTDDPSVTAKGRVRQIDPQADPVTRTFKVRVAVNDPPPAMRLGATVTGRVDVDHGHGISLPASALTATDKRPAVWVVDPNSLTVSLKPVEVARFDPGTVVLSGGLDGGEIVVTAGVQALVPGQKVRLEGARS*