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SCN18_25_1_16_R2_B_scaffold_94

Search features with annotation key words

Displaying items 91-120 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R2_B_scaffold_94_91
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91051..92280)
DNA (1230bp) protein (410aa)
Aminotransferase {ECO:0000313|EMBL:ABE60990.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABE60990.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Aminotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS07_NITHX
class I and II aminotransferase
SCN18_25_1_16_R2_B_scaffold_94_92
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92339..92689
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1H9_9RHIZ
AbrB family transcriptional regulator {ECO:0000313|EMBL:EXL06711.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
AbrB/SpoV domain-containing protein
SCN18_25_1_16_R2_B_scaffold_94_93
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92693..93106
DNA (414bp) protein (138aa)
DNA-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A3C90
DNA-binding protein {ECO:0000313|EMBL:KIZ47454.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_94_94
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93178..93486
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BZ0_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86096.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_25_1_16_R2_B_scaffold_94_95
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(93525..94454)
DNA (930bp) protein (310aa)
Citrate lyase beta subunit n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YR18_9BRAD
Citrate lyase beta subunit {ECO:0000313|EMBL:EHR05765.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hpcH/HpaI aldolase/citrate lyase family protein
SCN18_25_1_16_R2_B_scaffold_94_96
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94451..95617)
DNA (1167bp) protein (389aa)
carnitine dehydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377E309
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EJZ34272.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
coA-transferase III family protein
SCN18_25_1_16_R2_B_scaffold_94_97
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95770..97119)
DNA (1350bp) protein (450aa)
Ammonium transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS12_NITHX
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_94_98
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97159..97497)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHW8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig171, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glnK; nitrogen regulatory protein PII
SCN18_25_1_16_R2_B_scaffold_94_99
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97884..99197)
DNA (1314bp) protein (438aa)
Ammonium transporter AmtB n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS90_9BRAD
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ammonium transport protein
SCN18_25_1_16_R2_B_scaffold_94_100
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99335..99673)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS92_9BRAD
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EAQ37112.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCN18_25_1_16_R2_B_scaffold_94_101
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99916..100800
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWJ6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03345.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_25_1_16_R2_B_scaffold_94_102
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100814..101674)
DNA (861bp) protein (287aa)
acyl-CoA thioesterase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003607254
Acyl-CoA thioesterase {ECO:0000313|EMBL:KJC44039.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
tesB; acyl-CoA thioesterase
SCN18_25_1_16_R2_B_scaffold_94_103
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101826..103046
DNA (1221bp) protein (407aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABA03347.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABA03347.1};; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWJ4_NITWN
2-octaprenyl-6-methoxyphenyl hydroxylase
SCN18_25_1_16_R2_B_scaffold_94_104
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103041..103937)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B51EAD
Uncharacterized protein {ECO:0000313|EMBL:KJC58269.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
LysR family transcriptional regulator
SCN18_25_1_16_R2_B_scaffold_94_105
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104024..104557
DNA (534bp) protein (178aa)
DNA damage-inducible protein DinB n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B32BA2
DinB family protein
DinB family protein {ECO:0000313|EMBL:ACB95686.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_25_1_16_R2_B_scaffold_94_106
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104562..104759)
DNA (198bp) protein (66aa)
UPF0434 protein PMI42_01272 n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W8R7_9BRAD
hypothetical protein
UPF0434 protein PMI42_01272 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCN18_25_1_16_R2_B_scaffold_94_107
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104816..105352)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003057E8C
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ32594.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_25_1_16_R2_B_scaffold_94_108
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105456..105806
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P234_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC44034.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_94_109
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105841..106644
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGT77803.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KGT77803.1};; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000311F5AA
SCN18_25_1_16_R2_B_scaffold_94_110
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106641..107063
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E6F51E
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KJC61935.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_25_1_16_R2_B_scaffold_94_111
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

107109..107915
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DH39_BRAJP
Epimerase {ECO:0000313|EMBL:KGT77804.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
epimerase
SCN18_25_1_16_R2_B_scaffold_94_112
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107931..108605)
DNA (675bp) protein (225aa)
Peptidase S16, lon-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS14_NITHX
peptidase S16, lon-like
Peptidase S16, lon-like protein {ECO:0000313|EMBL:ABE60983.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_1_16_R2_B_scaffold_94_113
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108639..109562)
DNA (924bp) protein (308aa)
thioredoxin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036F8E9D
Thioredoxin {ECO:0000313|EMBL:EJZ35954.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
thioredoxin
SCN18_25_1_16_R2_B_scaffold_94_trna_1
unknown

Not on your lists

109844..109915
DNA (72bp)
transferRNA Gly
SCN18_25_1_16_R2_B_scaffold_94_114
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

110203..111090
DNA (888bp) protein (296aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJN9_MESAW
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AID31241.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative nucleoside-diphosphate sugar epimerase
SCN18_25_1_16_R2_B_scaffold_94_115
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111579..112841
DNA (1263bp) protein (421aa)
sorbosone dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036587DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL73468.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R2_B_scaffold_94_116
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112926..113510
DNA (585bp) protein (195aa)
cytochrome C n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E4279E
Simple sugar transport system permease {ECO:0000313|EMBL:ERF84447.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cytochrome C4
SCN18_25_1_16_R2_B_scaffold_94_117
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113556..114476)
DNA (921bp) protein (307aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2-dehydropantoate 2-reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR0_NITHX
SCN18_25_1_16_R2_B_scaffold_94_118
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114558..115295)
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21DE0_RHOPB
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49570.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
SCN18_25_1_16_R2_B_scaffold_94_119
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115433..116041)
DNA (609bp) protein (203aa)
DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EE2E24
Uncharacterized protein {ECO:0000313|EMBL:ERF84449.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
DSBA oxidoreductase
Displaying items 91-120 of 173 in total

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