name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_25_1_16_R2_B_scaffold_94_91
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(91051..92280)
|
Aminotransferase {ECO:0000313|EMBL:ABE60990.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABE60990.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Aminotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS07_NITHX
class I and II aminotransferase
|
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SCN18_25_1_16_R2_B_scaffold_94_92
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
92339..92689
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1H9_9RHIZ
AbrB family transcriptional regulator {ECO:0000313|EMBL:EXL06711.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
AbrB/SpoV domain-containing protein
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|
SCN18_25_1_16_R2_B_scaffold_94_93
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
92693..93106
|
DNA-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A3C90
DNA-binding protein {ECO:0000313|EMBL:KIZ47454.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
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|
SCN18_25_1_16_R2_B_scaffold_94_94
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
93178..93486
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BZ0_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86096.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
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SCN18_25_1_16_R2_B_scaffold_94_95
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(93525..94454)
|
Citrate lyase beta subunit n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YR18_9BRAD
Citrate lyase beta subunit {ECO:0000313|EMBL:EHR05765.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hpcH/HpaI aldolase/citrate lyase family protein
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SCN18_25_1_16_R2_B_scaffold_94_96
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(94451..95617)
|
carnitine dehydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377E309
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EJZ34272.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
coA-transferase III family protein
|
|
SCN18_25_1_16_R2_B_scaffold_94_97
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(95770..97119)
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Ammonium transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS12_NITHX
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
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SCN18_25_1_16_R2_B_scaffold_94_98
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(97159..97497)
|
Nitrogen regulatory protein P-II n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHW8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig171, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glnK; nitrogen regulatory protein PII
|
|
SCN18_25_1_16_R2_B_scaffold_94_99
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(97884..99197)
|
Ammonium transporter AmtB n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS90_9BRAD
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ammonium transport protein
|
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SCN18_25_1_16_R2_B_scaffold_94_100
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(99335..99673)
|
Nitrogen regulatory protein P-II n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS92_9BRAD
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EAQ37112.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
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SCN18_25_1_16_R2_B_scaffold_94_101
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
99916..100800
|
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWJ6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03345.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
|
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SCN18_25_1_16_R2_B_scaffold_94_102
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(100814..101674)
|
acyl-CoA thioesterase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003607254
Acyl-CoA thioesterase {ECO:0000313|EMBL:KJC44039.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
tesB; acyl-CoA thioesterase
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SCN18_25_1_16_R2_B_scaffold_94_103
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
101826..103046
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABA03347.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABA03347.1};; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWJ4_NITWN
2-octaprenyl-6-methoxyphenyl hydroxylase
|
|
SCN18_25_1_16_R2_B_scaffold_94_104
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(103041..103937)
|
LysR family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B51EAD
Uncharacterized protein {ECO:0000313|EMBL:KJC58269.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
LysR family transcriptional regulator
|
|
SCN18_25_1_16_R2_B_scaffold_94_105
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
104024..104557
|
DNA damage-inducible protein DinB n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B32BA2
DinB family protein
DinB family protein {ECO:0000313|EMBL:ACB95686.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
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SCN18_25_1_16_R2_B_scaffold_94_106
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(104562..104759)
|
UPF0434 protein PMI42_01272 n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W8R7_9BRAD
hypothetical protein
UPF0434 protein PMI42_01272 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
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SCN18_25_1_16_R2_B_scaffold_94_107
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(104816..105352)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003057E8C
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ32594.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
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SCN18_25_1_16_R2_B_scaffold_94_108
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
105456..105806
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P234_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC44034.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
|
|
SCN18_25_1_16_R2_B_scaffold_94_109
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
105841..106644
|
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGT77803.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KGT77803.1};; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000311F5AA
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SCN18_25_1_16_R2_B_scaffold_94_110
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
106641..107063
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E6F51E
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KJC61935.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
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|
SCN18_25_1_16_R2_B_scaffold_94_111
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria
|
Not on your lists |
107109..107915
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DH39_BRAJP
Epimerase {ECO:0000313|EMBL:KGT77804.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
epimerase
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SCN18_25_1_16_R2_B_scaffold_94_112
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107931..108605)
|
Peptidase S16, lon-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS14_NITHX
peptidase S16, lon-like
Peptidase S16, lon-like protein {ECO:0000313|EMBL:ABE60983.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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SCN18_25_1_16_R2_B_scaffold_94_113
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(108639..109562)
|
thioredoxin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036F8E9D
Thioredoxin {ECO:0000313|EMBL:EJZ35954.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
thioredoxin
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SCN18_25_1_16_R2_B_scaffold_94_trna_1
unknown
|
Not on your lists |
109844..109915
|
transferRNA Gly
|
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SCN18_25_1_16_R2_B_scaffold_94_114
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
110203..111090
|
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJN9_MESAW
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AID31241.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative nucleoside-diphosphate sugar epimerase
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SCN18_25_1_16_R2_B_scaffold_94_115
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
111579..112841
|
sorbosone dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036587DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL73468.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
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SCN18_25_1_16_R2_B_scaffold_94_116
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
112926..113510
|
cytochrome C n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E4279E
Simple sugar transport system permease {ECO:0000313|EMBL:ERF84447.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cytochrome C4
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SCN18_25_1_16_R2_B_scaffold_94_117
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113556..114476)
|
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2-dehydropantoate 2-reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRR0_NITHX
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SCN18_25_1_16_R2_B_scaffold_94_118
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(114558..115295)
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Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21DE0_RHOPB
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49570.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
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SCN18_25_1_16_R2_B_scaffold_94_119
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(115433..116041)
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DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EE2E24
Uncharacterized protein {ECO:0000313|EMBL:ERF84449.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
DSBA oxidoreductase
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