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SCN18_25_1_16_R2_B_scaffold_129_50

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 47464..48681

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 408.0
  • Bit_score: 733
  • Evalue 6.50e-209
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51274.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 408.0
  • Bit_score: 733
  • Evalue 9.10e-209
Extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 403.0
  • Bit_score: 536
  • Evalue 5.60e-150

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCCGCGTTTCTGCATTCTTTTGTCGACGACAGTTCTTGCGGTGCTGGCTCTGACGCCGGCGCAGGCCGCCGAACCGCTCAAGGTCGGCTTCATGACCGTCCGGTCCGGAGCCCTGGCTGCCGGCGGCCGGCAGATGGAGGAAGGCCTCAAGCTGTGCATGGACGAGCACCACGGCGAGATGGCCGGGCGAAAGATCGATCTCATCACCGCCGATACCGCCGGCCAGCCCGCGGTGACCAAGACCAAGGCGCAGGAACTGGTCGAGCGTGACGGCGCACAGGTTCTGATCGGACCGCTCGCCGCCTTCGAGGCGCTCGCCATCGACGACTATATCCGTCAGACCAAGACGCCGATCATTTCGCCCTCCGCCGCCGCGGAGGATTTGACCCAGCGTAAGCCGAACCCATGGTTCGTGCGCGCCGTCGGCACGTCCGCGCAGGCCCATCATCCGCTCGGCGAATACGCCGCCAAGGATCTGCACTACAAGAAGATCGCGATCATCGCCGACGACTTCGCGTTCGGGCACGAGATCGCCGCCGGATTCCAGCGCACGTTCGAGGAGAACGGCGGCAAGGTCGTTCAGAAGCTGTGGTCGCCGCTCAATACTGCGGAGTACGGCACCTACATCACGCAGATCGACCCCGACGTCGATGCGGTTTTCGCGGCCTTTGCTGGTGGCAACGGCATCAAGTTCCTGAGCGAGTACAAGAATTACGGCATGCAAAAGCCGGTTCTCGGCGCCATGACGACGGTGGATGAAGGCATCCTGAAGCGCATGGGCAACGAAGCCGTCGGCGTGATCTCCGCCGGCTGGTACAGCGCCGCGATCGACACGCCGGCCAACAAGAAGTTCGTCGCGGCCGTCCGCAAGGCCTACAACGCAGACCCCGGCTACTACACCGTTGGCGCTTACATGGCGTGCCAGTTCCTCAATAACGCACTCGAGCAGGTCAAAGGCGACATCTCCAACAAGGAAGCCTTCATGAAGGCCCTGCGCAACGTCAACATTCCCGAAAGCCCCTATGGCCCTGTGAAACTCGATAAATTCGGCCAGCCGATTCTCGACATCACGATCCGCAAGGTCGAGAAGAAGGATGGCAGGTTGCAGAACGTCGTGATCAAGACCTATCCAGCCGTGAGCCAGTTCTGGACCTATGGCGCGGATAAATTCCTCAAGAGCCCGGTCTACTCGCGCGACTGGAAGCCAGCGAAGTAA
PROTEIN sequence
Length: 406
MPRFCILLSTTVLAVLALTPAQAAEPLKVGFMTVRSGALAAGGRQMEEGLKLCMDEHHGEMAGRKIDLITADTAGQPAVTKTKAQELVERDGAQVLIGPLAAFEALAIDDYIRQTKTPIISPSAAAEDLTQRKPNPWFVRAVGTSAQAHHPLGEYAAKDLHYKKIAIIADDFAFGHEIAAGFQRTFEENGGKVVQKLWSPLNTAEYGTYITQIDPDVDAVFAAFAGGNGIKFLSEYKNYGMQKPVLGAMTTVDEGILKRMGNEAVGVISAGWYSAAIDTPANKKFVAAVRKAYNADPGYYTVGAYMACQFLNNALEQVKGDISNKEAFMKALRNVNIPESPYGPVKLDKFGQPILDITIRKVEKKDGRLQNVVIKTYPAVSQFWTYGADKFLKSPVYSRDWKPAK*