ggKbase home page

SCN18_25_1_16_R2_B_scaffold_94_59

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 54773..55378

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002ED7931 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 194.0
  • Bit_score: 318
  • Evalue 2.50e-84
UPF0314 protein HMPREF9695_04610 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 193.0
  • Bit_score: 317
  • Evalue 1.00e-83
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 201.0
  • Bit_score: 306
  • Evalue 4.70e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGCCCGGCCACACAGGGTCCGTTCCGCCGCCGCTCCGTCTCTCCGTGCTCAATGGCGCGCTGATCGTTCTCGGCCTGCTGACCGCGCAGGCCGCGATCCTGTACGCCATGGGCCGGGTCCCGATCTGCACCTGCGGCTACGTCAAGTTCTGGCACGGCGTGGTGCAAAGCTCCGAGAACTCGCAGCATCTTACCGACTGGTACACGTTCTCTCATATCATCCATGGATTCCTGTTTTACGGCGCAACGTGGCTCGTCCTGCCTCGCGCGCCGTGGATCGCGCGGCTATTGATCGCCATGGTGATCGAGGGCGGTTGGGAGATCGTCGAGAATTCGCCGTGGATCATCGACCGCTATCGCGCCGGCACCATCTCGCTGGATTATTATGGCGACAGCATCGTCAATTCGCTGTCCGACACGCTGGCTATGATCGTCGGCTTCGTGCTCGCGCGCAAATTGCCGGTTGCTTTGACAATCGCGATTGCGCTTCTGTTCGAGGTCCTGGTCGGATTGCACATCCGCGACAATCTCACCCTCAACGTCATCATGCTGATCCATCCCTTCGAAGCCATCCGCCACTGGCAGGCCGGCCCGCCCATCATATGA
PROTEIN sequence
Length: 202
MPGHTGSVPPPLRLSVLNGALIVLGLLTAQAAILYAMGRVPICTCGYVKFWHGVVQSSENSQHLTDWYTFSHIIHGFLFYGATWLVLPRAPWIARLLIAMVIEGGWEIVENSPWIIDRYRAGTISLDYYGDSIVNSLSDTLAMIVGFVLARKLPVALTIAIALLFEVLVGLHIRDNLTLNVIMLIHPFEAIRHWQAGPPII*