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SCN18_25_1_16_R2_B_scaffold_120_118

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 123625..124362

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 245.0
  • Bit_score: 476
  • Evalue 3.20e-132
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 245.0
  • Bit_score: 476
  • Evalue 1.60e-131
tRNA pseudouridine synthase A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=TRUA_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 245.0
  • Bit_score: 476
  • Evalue 1.10e-131

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACAAACTCACCATCGAATATGACGGCGGGCCGTTCTGCGGCTGGCAGTATCAGGACAACGGCCCGTCGGTGCAGGGCGCGCTGGAGGCGGCAGTGAAGGCGATCTGCGGCGACGACGTTCGCGTGCATGGCGCCGGCCGCACTGATGCCGGCGTGCATGCGCTCGCGCAGGTTGCCCACTGCGATATCGCAAAGCCGTTCGCGCCGAATCGTTTGCGCGACGGTCTCAATGCGCATCTGCGGCCGCATCCGATCGGCGTGCTCGAAGCCGAGATCGTGCCTGATACGTTCGAGGCGCGATTCTCCGCGATCAAGCGGCACTACGTCTATCGCATTGCCAACCGGCGCGCGAACCTCGCCATCGATGTGGGGCACGTCTGGCGCGTGCCACGGCCGCTCGATGCAGAGGCGATGCACGCGGCGGCGCAGCGCTTGCTCGGCAAGCACGACTTCACGACGTTCCGCGACACCGAATGCCAGGCGAAATCACCGGAGAAGACCCTCGACCAGCTCGATGTCGTCAGGGACGGCGACAACGTCAATATCACAACCTCGGCGCGATCGTTCCTGCATAGCCAGGTGCGCTCGATGGTCGGCTCGCTGGTCTGGGTGGGACACGGTCGTTGGACTGCTGATGATATGTCCGCTGCGCTTGCCGCGCGCCGCCGCGAAGCCTGCGGTCCGGTCGCGCCGCCCGATGGACTTTATCTGGTGCGGGTGGATTACTGA
PROTEIN sequence
Length: 246
MPRYKLTIEYDGGPFCGWQYQDNGPSVQGALEAAVKAICGDDVRVHGAGRTDAGVHALAQVAHCDIAKPFAPNRLRDGLNAHLRPHPIGVLEAEIVPDTFEARFSAIKRHYVYRIANRRANLAIDVGHVWRVPRPLDAEAMHAAAQRLLGKHDFTTFRDTECQAKSPEKTLDQLDVVRDGDNVNITTSARSFLHSQVRSMVGSLVWVGHGRWTADDMSAALAARRREACGPVAPPDGLYLVRVDY*