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SCN18_25_1_16_R2_B_scaffold_105_13

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(9625..11031)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 468.0
  • Bit_score: 904
  • Evalue 9.10e-261
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 468.0
  • Bit_score: 904
  • Evalue 4.50e-260
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEUC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 468.0
  • Bit_score: 904
  • Evalue 3.20e-260

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGTCCAAACCGACCACGCTCTACGACAAGATCTGGAACGATCATCTGGTTCACGAAGCCGACGACGGCACCTGCCTGCTCTACATCGACCGCCACCTCGTACATGAAGTCACGAGTCCGCAGGCGTTCGAAGGTCTTCGCGCGTCGAAGCGCAAGGTGCACGCGCCGGAGAAGACCCTCGCCGTCGTCGATCACAACGTGCCGACCACCGATCGCTCCAAGCCCAATCCCGATCCTGAGAGCATCGAGCAGATCGAAGCCCTGGCGCGCAACGCCAAGGAATTCGGCATCGAATACTATAACGAGTTCGACAAGCGCCAGGGCATCGTCCACGTCATCGGCCCGGAGCAGGGTTTTACGCTGCCGGGCACCACGATTGTCTGCGGTGACAGCCACACCTCGACCCACGGCGCATTTGGCGCGCTCGCCCACGGTATCGGCACATCCGAGGTCGAACATGTGCTCGCGACCCAGACGCTGATCCAGAAGAAGGCGAAGAACATGCGCGCCGTCGTCGACGGCAAACTGCCCGATGGCGTCACCGCCAAGGACATCATCCTGGCTATCATCGGCGAGATCGGCACCGCGGGCGGCACCGGCTATGTGCTGGAATACGCCGGCGATGCCATTCGTGCGCTGACCATGGAAGGCCGCATGACGGTCTGCAACATGTCGATCGAAGGCGGCGCGCGCGCCGGCCTCGTCGCGCCCGACGAGAAGGCCTATGAATTCCTGAAAGGCCGCGCCAAATCGCCGAAGGGCGACGCCTGGGACGCCGCGATGCGCTACTGGGAGAAACTGCGCAGCGATGACGGCGCACATTTCGACCACGAAATTCGTCTCGACGCTGCGAAGCTGCCGCCGATCGTGACCTGGGGCACGAGCCCGGAGGACGTCATCTCGGTGACCGGCAAGGTGCCGAATCCCGCTGACATCGCCGATGAAGCGAAGCGCCTCTCCAAGGAACGCGCGCTGCATTACATGGGCCTCGCCGCCGGCACCAAGGTCACTGACATCAAGCTCGATCGCGTGTTCATCGGCTCCTGCACCAACGGCCGCATCGAGGATTTGCGCGCCGCCGCGAAGGTCGCCGACGGCAAGACCGTCAACGCCAATGTCAACGCCATGATCGTTCCGGGCTCCGGCCTCGTGAAGGAGCAGGCAGAAGCCGAAGGCCTCGACAAGATCTTCATCAAGGCCGGATTCGAATGGCGCGAGCCGGGTTGCTCCATGTGCCTCGCGATGAACCCCGACAAGCTGAAGCCGGAGGAGCGCTGCGCCTCGACCTCGAACCGCAATTTCGAGGGACGGCAAGGCTTCAAGGGCCGCACGCATCTGGTGTCGCCTGCGATGGCAGCGGCAGCGGCGATCGCCGGACACTTCGTCGACGTGCGTGAATGGCACTAA
PROTEIN sequence
Length: 469
MSKPTTLYDKIWNDHLVHEADDGTCLLYIDRHLVHEVTSPQAFEGLRASKRKVHAPEKTLAVVDHNVPTTDRSKPNPDPESIEQIEALARNAKEFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRALTMEGRMTVCNMSIEGGARAGLVAPDEKAYEFLKGRAKSPKGDAWDAAMRYWEKLRSDDGAHFDHEIRLDAAKLPPIVTWGTSPEDVISVTGKVPNPADIADEAKRLSKERALHYMGLAAGTKVTDIKLDRVFIGSCTNGRIEDLRAAAKVADGKTVNANVNAMIVPGSGLVKEQAEAEGLDKIFIKAGFEWREPGCSMCLAMNPDKLKPEERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDVREWH*