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SCN18_25_1_16_R2_B_scaffold_105_16

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12599..13126)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RIMM_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 172.0
  • Bit_score: 278
  • Evalue 3.20e-72
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 172.0
  • Bit_score: 278
  • Evalue 9.20e-73
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 172.0
  • Bit_score: 278
  • Evalue 4.50e-72

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACAGCGCGCATCTGCGTGGCCCGGATCGGCGCCGCGCATGGCGTGCGCGGCGAAGTACGGTTATGGGTCTTCACTGAAGATCCGCTCGCCGTCATGCGTTACGGCCCGCTCTCGACAAAAGACGGCGCGCGACACCTCGAGATCGCGCGGGCGCGCGAGGCCAAGGATCATCTTGTCGCGACGCTCAAAGGCGTCACCACACGCGACGAGGCCGAACGGCTCAACGGGATCGAGCTCTACGTTGCCCGCGACAAGCTGCCGGCGACGGACGACGATGAATACTATCATGCCGACCTGATCGGACTGGCCGCCGTCGGCGTTGACGGCGGTCCAATCGGTCGCGTCATCGCGATCCATAATTTCGGCGCCGGCGACATCGTCGAGATCGCACCGACCCGTGGTCCAACACTGATGCTGCCGTTCACCAATGCCGTGGTGCCGACGGTCGATATCGCCGGTGGGCGCATTACGATCGATCGGCCCACCGAGATCGAGGGCGATGAACCGGATCGCCAACCATCATGA
PROTEIN sequence
Length: 176
MTARICVARIGAAHGVRGEVRLWVFTEDPLAVMRYGPLSTKDGARHLEIARAREAKDHLVATLKGVTTRDEAERLNGIELYVARDKLPATDDDEYYHADLIGLAAVGVDGGPIGRVIAIHNFGAGDIVEIAPTRGPTLMLPFTNAVVPTVDIAGGRITIDRPTEIEGDEPDRQPS*