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SCN18_25_1_16_R2_B_scaffold_105_22

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(17927..18652)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator, effector binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ2_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 242.0
  • Bit_score: 421
  • Evalue 3.30e-115
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 242.0
  • Bit_score: 421
  • Evalue 9.20e-116
Transcription activator, effector binding protein {ECO:0000313|EMBL:ABE64305.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 242.0
  • Bit_score: 421
  • Evalue 4.60e-115

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATCGCCACAGCTCCTTTCGCCGTCTGGCGATCATCATGATCCCGGCCTTGTCCCTGGGGTTCTCCGCCACGCTGGCCCAGACGCCACCTGCGACCCCTCCCGGCGCGACGGCTCCCGCCACCCCGGCTCCTCCGGCGGCGCCGACTCCGCCCGGCACGCCAACGCCGGCGACGCCGGCTCCGCCCCCCGCCGAGGTGCAGACGCCGGCGAGCCCGGCCGCCGAAGCGCCAAAACCATCGGCGACGGCCCCCGTGCAAACTGCCGATCCATTCGGCGAGGAGATCACGCTGACGGCAAAGACGGTGTTGACCTTCCGCGGCAACGCGACCTGGGATACCGCGTTCGATACATTGATCGATTCTTTCAAGGAACTGACGGCCGTTCTCGACAAACAGGGCGTCAAGGCCGCCGGCAACATGATGATCGTCTATACCTCGACCGACGACAACGGCTTCTCGTTTCTCGCCGAAGTGCCGGTCGATCAGGACCTCAAGGACCTGCCCAAGAATATGAGCATGGGCAAGTCACCGGAGGGCAAGGCGCTCAAGTTCGTCCACCGCGGCTCCTACGACAACATGGACAACACCTATGAGGCGATCACCAATCACCTCGACGACAAGAAACTCGAGGCCAAGGACACCTTCATCGAGGAATACGTGACCGATCCGCTGAAGACTGAAGAAGATAACCTCGTCATCAATGTCTATGTGCCGCTGAAGTGA
PROTEIN sequence
Length: 242
MNRHSSFRRLAIIMIPALSLGFSATLAQTPPATPPGATAPATPAPPAAPTPPGTPTPATPAPPPAEVQTPASPAAEAPKPSATAPVQTADPFGEEITLTAKTVLTFRGNATWDTAFDTLIDSFKELTAVLDKQGVKAAGNMMIVYTSTDDNGFSFLAEVPVDQDLKDLPKNMSMGKSPEGKALKFVHRGSYDNMDNTYEAITNHLDDKKLEAKDTFIEEYVTDPLKTEEDNLVINVYVPLK*