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SCN18_25_1_16_R2_B_scaffold_105_25

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(21046..21744)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=3 Tax=Oligotropha carboxidovorans RepID=F8BGU7_OLICM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 433
  • Evalue 1.00e-118
putative RNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 433
  • Evalue 2.90e-119
Putative RNA pseudouridine synthase {ECO:0000313|EMBL:AEI04986.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 433
  • Evalue 1.50e-118

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGACACTCCCCAACCGACAGCGGAAGAGATCCAGGCCCGCGTACTCCATCGCGACGGCCTGATGCTGGTGATCGACAAGCCGGCCGGCATTCCCGTGCATCGCGGTCCCAAGGGCGGCGCCAATCTGGAGGCCTCGTTCGACGCTCTGCGGTTCGGCCTGCCGCGCCCGCCGGTCCTCGCCCACAGGCTCGATCGCGACACCTCGGGCTGTCTGGTGCTCGGACGCCATCGGAAGGCGACGGCTTCACTCGGACTTCTGTTCAAGCACAACAAGATTTCCAAGACATATTGGGCCATCGTGGAAGGCGGCCCCGCCGAAGACGAAGGCACGATCGACATTCCGCTCGGCAGACTTAATGCGGAGCGCGGCTGGTGGCAGAAGCCGGATCCCAACGGGCTGCCATCGACGACGCGGTGGAAAGTTCTGGGACGTGGCCAAGACTTGACCTGGGTCGCACTGGAACCGGTGACCGGGCGCACCCATCAACTGCGCGTGCATTGCGCGGCGATGGGCTGGCCGATCGTCGGCGATAACATTTACGGCAACGGCCCACGCTTCGGCGAACCGAGCCTGCATCTGCATGCGCGCGAAATCGCAATTCCACTCTCCAAGAATAAGCCACCTGTGGTGGTCACCGCACCGGCGCCAAGGCATCTGCACGAGCGACTTGCGGCGTGCGGGTGGGACGAGGGCTGA
PROTEIN sequence
Length: 233
MDTPQPTAEEIQARVLHRDGLMLVIDKPAGIPVHRGPKGGANLEASFDALRFGLPRPPVLAHRLDRDTSGCLVLGRHRKATASLGLLFKHNKISKTYWAIVEGGPAEDEGTIDIPLGRLNAERGWWQKPDPNGLPSTTRWKVLGRGQDLTWVALEPVTGRTHQLRVHCAAMGWPIVGDNIYGNGPRFGEPSLHLHAREIAIPLSKNKPPVVVTAPAPRHLHERLAACGWDEG*