ggKbase home page

SCN18_25_1_16_R2_B_scaffold_170_25

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 19207..19668

Top 3 Functional Annotations

Value Algorithm Source
UPF0311 protein Rpal_1987 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=Y1987_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 1.50e-65
UPF0311 protein OO17_29470 {ECO:0000256|HAMAP-Rule:MF_00775}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 9.50e-66
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 4.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGCGCCTGTTCTCGAAACCAAATACGTTTTCACCATCACCGCGCTGATCGGTCCCGTCATCAATGCCGGCGAGATCGGCCACGGCGTGCGCCGCGTCATTCCGGTGATCGGCGGCGAGATCCGCGGCGAGGGCATCAGCGGCAAGATCCTGCCGTCGGGCGCCGACTTCCAGATCATCCGCGCCAACGAGCTGATCGAGCTGGAGGCGAAATATGCGCTCGAGACCGACGACGGTGCGTTCGTCTATGTCGCCAACTACGGCATCCGCTTCGGGCCGCCGGAGTTGATGCAGCAACTCAAGCGGGGCGAGCCGGTCGATCCGAAGCTGATCTATTTCCGTACCACGCCGCGCTTCGAGACCGGCCATCCGAAATATCGCTGGCTGATGGAGAACCTGTTCGTGGGATCGGCCGCGCGCCACGCCGAGCGCGTGGTCATCGACGTGCATCAGGTGCTGTAG
PROTEIN sequence
Length: 154
MAPVLETKYVFTITALIGPVINAGEIGHGVRRVIPVIGGEIRGEGISGKILPSGADFQIIRANELIELEAKYALETDDGAFVYVANYGIRFGPPELMQQLKRGEPVDPKLIYFRTTPRFETGHPKYRWLMENLFVGSAARHAERVVIDVHQVL*