ggKbase home page

SCN18_25_1_16_R2_B_scaffold_265_18

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(16919..18382)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:CDG40940.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDG40940.1};; TaxID=1382230 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia.;" source="Asaia platycodi SF2.1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 484.0
  • Bit_score: 526
  • Evalue 2.00e-146
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F2C14D similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 476.0
  • Bit_score: 637
  • Evalue 5.80e-180
mocR2; rhizopine catabolism regulatory protein MocR similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 468.0
  • Bit_score: 432
  • Evalue 1.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_P_Burkholderiales_64_62 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGGACAATGCGCCGCGCTGGGCGATAGACAATCTGGAGCTCGATCGCGTCGGCCCCACGACACTCGCCGACCAGATCGCACGCCACATCGAAGTCGCGATCAGCGAAGGCGCACTTCATCCTGCAGGCCGGTTGCCTTCATGGCGCGACCTCGCAGCGCAACTCGGAGTCGCACGCGGGACCGTGAAGGCGGCTTACGAAAAGCTTATCGATCGACAGCTTCTCGTAACGGCGGGCTCCGCAGGAACCCGCGTTGCCAACCCGCTTCCGCCTTCGGTCGCGCCGATCACTACCTCCGATGCCGAGCTGCTTCAGCCACCGGATGCTTTTTATCGCTCCGGCGATCCACTCGTGTTCCAGATGGGCGTCCCCGCGCACGACGCATTCCCTGGTACTCTTTGGGCGCGCCTGAATCGGCAAGCGGTGCAGGCCACGGCGCTGCGGACCGGCCACTCGGACTCGCGCGGCACGATAGAGTTGCGATCCGCACTTGCATCGCATGTCGCCATCGCCCGAGGCATCGAATGCTCGCCCGACCAGGTTATCGTGACCGGAGGCTTTCGAGCTGGATTGGCGATCGCGCTCCAAACCATTGATGCGAAGGGCAAGGAGGCTTGGGTAGAAGACCCCAGCTACCCTGCGACTCGGCTCGCACTCGATCTTTCCGGCGTCCGGACTGTTGCCGTTCCGGTCGATGATCAGGGACTCGTTGTCTCGCGTGGCCGCAAACTAGCCCCGCGGGCCGCTTTCGCCGTCGTCACACCTGGACAGCAGGCGCCAAGCGCAGTGACGCTATCGCCACAGCGCCGGACCGCACTTCTTCGCTGGGCTACAGAATCCGATGCTTGGATCATCGAAGATGATTACCTTGCAGAGCTGCATCTTTCGGGCCGGCCCGCAAACGCACTGGCATCGGGGGCCGGCGCCGATCGCGTCATTCACCTCGGGACGTTCAGTAAAACTATCAGCCCCATGGTCGGCATCGGGTTCCTGGTCGCGCCGATGCCGCTGGCCCGTCAATTGATCGATATCGCCACCTGGCTCGGTGCACCGCCTAACGCGGCCGTCCAGCTCGCGCTCGCCGAATTCCTGCGCGAAGGTCACTATTTGCGCCATCTCCGGCGGACGCGACGGCTCTACAGCGAACGAAGACGATGCTTGCTGGAGACGCTCGCGACGCTTGGAATCGATACGGCGATCCCGGCGGCGTTGTCAGTAGTCCTGCCGTTGCCAGACGGATTCGACGACTTGGCGTTGATGAACAAAGCGTGGGCGGAGGGCATCAAACCCGCACCTCTGTCCCCCTGGTTTGCAGACGCGAAGCGTACCCGCTCCGGCTTGTTGCTCGGGGTCGCCAATGTCCTGGAGCGGAGAGCTGAGCACGATTGTCGGCAGTTACTCGAGATGATAGGCGATCTGTCGAAGATTGCCGGACAAAGCTCGCCTCCGTTTGTTCCGGCATAA
PROTEIN sequence
Length: 488
MDNAPRWAIDNLELDRVGPTTLADQIARHIEVAISEGALHPAGRLPSWRDLAAQLGVARGTVKAAYEKLIDRQLLVTAGSAGTRVANPLPPSVAPITTSDAELLQPPDAFYRSGDPLVFQMGVPAHDAFPGTLWARLNRQAVQATALRTGHSDSRGTIELRSALASHVAIARGIECSPDQVIVTGGFRAGLAIALQTIDAKGKEAWVEDPSYPATRLALDLSGVRTVAVPVDDQGLVVSRGRKLAPRAAFAVVTPGQQAPSAVTLSPQRRTALLRWATESDAWIIEDDYLAELHLSGRPANALASGAGADRVIHLGTFSKTISPMVGIGFLVAPMPLARQLIDIATWLGAPPNAAVQLALAEFLREGHYLRHLRRTRRLYSERRRCLLETLATLGIDTAIPAALSVVLPLPDGFDDLALMNKAWAEGIKPAPLSPWFADAKRTRSGLLLGVANVLERRAEHDCRQLLEMIGDLSKIAGQSSPPFVPA*