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SCN18_25_1_16_R2_B_scaffold_212_34

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(32916..33947)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IP11_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 334.0
  • Bit_score: 354
  • Evalue 7.00e-95
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR78279.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 327.0
  • Bit_score: 359
  • Evalue 3.00e-96
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 342.0
  • Bit_score: 317
  • Evalue 2.70e-84

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGAAGTCGCTCGTAATCGGCGTTCTCGTTACCGTCCTCGGGTCAGGCTCTGCATGCGCGGGCGACAAGATCAATCTTCGACTCGGCGATAGCTTGCCGATCGGCCACATCATCCATGAAGTTGTCACCAAGCCGTTCATCGCGGCGGTCGCGGCTCGCACCAACGGCGACGTGACGATCGCCCATTTCCCGGCCGAGCAGCTCGGCAAAGCCAAGGATCTGTTGCGGCTGACGCAATCCGGTGTGGTCGACATCGGTTATGTCGTTCCGTCTTATGCGTCGGACAAGATGCCTCTGACTGCGGCCGCGGAACTGCCGGGTGGCTTTCGCAATGCTTGTCAGGGGACGGCGGCGTATTGGGCGCTGACGCGCGATGGCCAGTTCCTGTACCAGAAAGAGTTCGCTCCGAACGGAATCCGGCCGCTGATCACGTTCGCGTTGCCGACATATCAATTTCTGCTCTCGACAAGGAAGCCGGTGACGTCGCTCGCCGACATGGAGGGGTTGAAAATACGCACCGCGGGTGGAGCGCTCGATCTGATGGTGCGTGGTATCAAGGCCGTGCCAATCCGGATGTCGCCCCCGGAAATCTACGAGTCGATGTCCCGCGGGACGCTCGATGGCGCGCTGCTCGGTTATCAAAGTGCGTCATCGTATGACTTGATCGGCCTGTTGAAGACCGGCACGATCAACGAACCGCTGTCATCGGTGGTGATCACGTATTCGATCAGCACGGCGAAGTGGAAGGCACTGCCGCCCACAGTCCAAAAGGTGATGGCTGAAGAGGGCGAGCGCATTACCAGGGAAAGTTGTGTCAAGTTTGCCAAGGCGGAAGAGCAGGCGCTCGCCAAGGCCAAAGCCAAGGGCATCAAGCTCATTCAGTTCTCGCCCGAGGACAACAAGACGATGGCGTCGGTATTCGATGCTGTGAACAAGGAGTGGGCCGCCGGCCTCGATAGCCGGGGCAAGCCCGGGAGCGAGGCATTGAAAGTCTGGAAGAGCGCGCTCAGCGCGGCATCCGAAGCGCATTGA
PROTEIN sequence
Length: 344
MKSLVIGVLVTVLGSGSACAGDKINLRLGDSLPIGHIIHEVVTKPFIAAVAARTNGDVTIAHFPAEQLGKAKDLLRLTQSGVVDIGYVVPSYASDKMPLTAAAELPGGFRNACQGTAAYWALTRDGQFLYQKEFAPNGIRPLITFALPTYQFLLSTRKPVTSLADMEGLKIRTAGGALDLMVRGIKAVPIRMSPPEIYESMSRGTLDGALLGYQSASSYDLIGLLKTGTINEPLSSVVITYSISTAKWKALPPTVQKVMAEEGERITRESCVKFAKAEEQALAKAKAKGIKLIQFSPEDNKTMASVFDAVNKEWAAGLDSRGKPGSEALKVWKSALSAASEAH*