ggKbase home page

SCN18_25_1_16_R2_B_scaffold_212_47

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(45220..46947)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVT0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 570.0
  • Bit_score: 696
  • Evalue 1.30e-197
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCE10568.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 570.0
  • Bit_score: 696
  • Evalue 1.80e-197
ABC-type Fe3+ transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 561.0
  • Bit_score: 683
  • Evalue 3.10e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGTCAGGACAATCGCTCTCAATAAGCCCGCCGCGCAGACTGATCGGTATTGAGCCTGGCCGATACACGGCGTCGCTTACTCTTGTAGCGGTGTTGGCGGCTCTGACACTTTATCCGATCGGCACGCTTCTCTATGGAAGTCTGAGCAGCGCGCCTCCAGGGCAGGCCGGCACCCTTGATTTCTCCGGATATGTTTCCCTCTTTAACGTTCATACGTTGTCCATCCTAGCGGTCACCGTCGGAATGTCGCTGCTGAAGACCGTTCTCAGTCTGATTCCGGCGACGATTCTTGCATGGCTGATTTCGCGAACCGACATTCCGGCACGGGGTGTGCTGGAATTGCTGATCGGACTTCCGTTCTTCATTCCCCCGATCTTGACCGCCATGGGGTGGGCCATGCTCGGAAATCCCACCGCCGGCTCGATCAATCAGGTTTGGCGGGCGCTGACGGGAGCAACTGCGCCGATCGTGAATGTCTATTCGTATGGCGGAGTGGTCTGGCATCTGATGCAGTTCACGGTGCCGTTCGCCTTCATCCTTCTTATCGAGGCGTTCCGGTCCATGGACCCCTCGCTCGAGGAGAGCAGCCGCACGTCCGGCGCGGGCATTTTCAAGACCTTTCGCAAAGTCACGCTGGCGCTCATGCTGCCAGCGCTCTCGAGCGTCGCCATCTTGTCCGTGATTGGTGGGATCGAAGCGTTCGAGTCACCGCTTTTCTTTGGAATTCCCGCCGGCATTCATGTTGTGACGACAGAGATTTACGACTCGATCAACAATCGCGCGACACCGAATTATCCATACGCCACCGCGTTGTCCTTCGCCGTGATTCTTTTGATGGCGCTTATGGTCGCGTGGCAATGGCGACTGCTCCAGGGACGCAGTTTTCAGACGATTTCGGGAAAGGCGTTCTCGCCGCGACCTATCGAGTTGGGATCATTGCGGTGGGTGGCATTCGGGTTCTGTGCGCTCAACGTGCTGGTATTCACGGTTCTTCCCGTGCTGCAGCTCGTGGTCAGCTCGTTTTCACAATATTACGGCTTCTATGGTTGGGACATGCTCACGGTGAGTCATTACCGGGACGTCCTGCACAACGATCTCTTTTGGCGATCTGCGACCAACACTGCCATGCTTGGCGTTGTGGGTGCGACCCTGACCATGATTCTCGGCAGCGTCGTCGCTTATGTGGTCGTCCGAACCAAGCTTCCGTTTCGGCATCTCATCGATCTCATCGCGTGGCTTCCGTGGATGATGCCGGGCATGGTGTTGGGGCTTGGCTTCCTGTGGGGATTTGCGATCCTGCCTCACGCCATCGGAATTTATGGTTCGTTATGGGCCCTGCTGCTCGCTTACCTGGCGCTTGGGACGCCGCTCAGCGTTCGGACCATGAGCACTGCCTTTTCGCAGCTCTCCCACGATCTCGAAGAATCATCACGCGTTCACGGCGCGAGTTGGGCAACCACATTCAGGAAGATCGTCGTCGCGCTCACATTGCCGTCGTTTTCGGTCGGATGGATCCTGACTTTTTTCATGATCTTCCGTGAGCTGAGTGCATCCGTTTTGCTTTACTCGATCGGCAATGAAGTTCTCCCCGTCACGGTGCTCCGTCTGTGGGAGGAGGGAAAGGCCGAAGATGTCAGTGCGATCGCTGTCATGATGCTCGTGGTCGTACTCATCTTTCGCGGATTTCATCTGATCATGGTGAAGCGATGGATCGCTTCACGAACATAA
PROTEIN sequence
Length: 576
MSGQSLSISPPRRLIGIEPGRYTASLTLVAVLAALTLYPIGTLLYGSLSSAPPGQAGTLDFSGYVSLFNVHTLSILAVTVGMSLLKTVLSLIPATILAWLISRTDIPARGVLELLIGLPFFIPPILTAMGWAMLGNPTAGSINQVWRALTGATAPIVNVYSYGGVVWHLMQFTVPFAFILLIEAFRSMDPSLEESSRTSGAGIFKTFRKVTLALMLPALSSVAILSVIGGIEAFESPLFFGIPAGIHVVTTEIYDSINNRATPNYPYATALSFAVILLMALMVAWQWRLLQGRSFQTISGKAFSPRPIELGSLRWVAFGFCALNVLVFTVLPVLQLVVSSFSQYYGFYGWDMLTVSHYRDVLHNDLFWRSATNTAMLGVVGATLTMILGSVVAYVVVRTKLPFRHLIDLIAWLPWMMPGMVLGLGFLWGFAILPHAIGIYGSLWALLLAYLALGTPLSVRTMSTAFSQLSHDLEESSRVHGASWATTFRKIVVALTLPSFSVGWILTFFMIFRELSASVLLYSIGNEVLPVTVLRLWEEGKAEDVSAIAVMMLVVVLIFRGFHLIMVKRWIASRT*