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SCN18_25_1_16_R2_B_scaffold_151_94

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(84864..86345)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLN4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 494.0
  • Bit_score: 837
  • Evalue 3.90e-240
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 494.0
  • Bit_score: 837
  • Evalue 1.10e-240
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE62863.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 494.0
  • Bit_score: 837
  • Evalue 5.50e-240

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
GTGAGCAGTTCCTCTCCGAATACGGTGCTCGCCACGCAAGGGCTGGCGCAATGGGTGTGGCGCGGCGCCAGATGTCTTCCGGTGCTGGCGGTCATCGCTACGTCGGCCGGTTGCATTTTGACCAGGGATCTACCCGATCCGGCGTTGGACATCCCGACAGGCTATAAAGCGGCGCGCCTGACCACGACCGGTGCACCGCCAACACTTGACTGGTGGCGCGGCTTCCACTCGCGCGAGCTGACGGGCCTGATGGAAGAAGCCCAGACGGTCAATCTGGATATTGCAGCGGCGACCGCGCGGATCATCCAGGCCGATCAGCAAGCCCGGATCGCTGGAGCCGCATTGTTGCCCAGCGCGAATGCTGGCGGACAGGAAACCTACTCCCGGACGTCGGGATCGAGCTCCAGCGGTCTGAACAACGGCGGACGTGAGGTCGTCAACTACTCGGCCTCTCTCAGCGCCAGTTATGAACTCGATTTCTGGGGCAAGAATCGCGACGCCGCGCAGGCAGCGGAGGAAACAGCGACTGCGAACCGCTTTGACCGGGATGTGGTTGCCCTGACGACGCTGACCAGCGTCGCCAATGCCTACTTCCAGGTTTTGGCCGCACAAGACCGCATTCGGACGGCCAACCGGAACATCGCCAGCGCTGTTCGTATCCTTGAGGCCATCAAGCAACGCCTGCAGGCCGGCACGGGCACCGATCTCGACGTCGCGCAGCAGGAAAGCGTGCTGGCCAATCAGCGCGCGGCCGTTCCGCCGCTTCGTCAGACTCTGGCGCAGAACATCAATGCATTGGCAACGCTCGTGGCACGGCCACCCGAGAGCGTGAAGGTCAAGGGTGGTTCGCTCAATCAAATCGCGGCCCCGCGGGTGACGCCGGGCCTGCCGTCGGAATTGCTGACTCAGCGGCCGGACATCCGTCGCCAGGAAGCGCAACTCGCATCCGCGACTGCTAATGTCGGCAGTGCGCGAGCACAATTCTTCCCGAGTATCCAATTGACCGGACAGGGCGGCTATCAAAGCGCTGCTTTGGTCTCGCTGTTCCAGCCGCACGCTGCCTTCTTCAGTCTCGTCGGCGGGTTGACGCAACCGATCTTCGACGGCGGCCGAATTCTCGGCAATTTCAGGTATACGAAGGCCCAGCAAGACGAAATGCTCCAAACCTACCGCAAGACCGTGGTTTCGGCTTTCGCCGACGTCGACAATGCGTTGATTGCGATTCGGCAGACCACCGAACGGCTGCGGCTTCAGCGGGAGGTCCTAGCCGCATCGCGGCGGGCGTTTGAACTCTCCGAGCAGCAGCTTCGGGCAGGCACTGCCGACATCGTAACCGTGCTAAATACGCAACTGACGCTGTTTCAGGCGGAAGATTCGCTGTCGCAGGCACAGCTTGCGCGGCTGCAGGCGATCGTGAGCCTATATCAGGCGCTGGGCGGCGGCTGGGAACCGAGGATGGAGAGGCCGGCCAATGCTCTTTAA
PROTEIN sequence
Length: 494
VSSSSPNTVLATQGLAQWVWRGARCLPVLAVIATSAGCILTRDLPDPALDIPTGYKAARLTTTGAPPTLDWWRGFHSRELTGLMEEAQTVNLDIAAATARIIQADQQARIAGAALLPSANAGGQETYSRTSGSSSSGLNNGGREVVNYSASLSASYELDFWGKNRDAAQAAEETATANRFDRDVVALTTLTSVANAYFQVLAAQDRIRTANRNIASAVRILEAIKQRLQAGTGTDLDVAQQESVLANQRAAVPPLRQTLAQNINALATLVARPPESVKVKGGSLNQIAAPRVTPGLPSELLTQRPDIRRQEAQLASATANVGSARAQFFPSIQLTGQGGYQSAALVSLFQPHAAFFSLVGGLTQPIFDGGRILGNFRYTKAQQDEMLQTYRKTVVSAFADVDNALIAIRQTTERLRLQREVLAASRRAFELSEQQLRAGTADIVTVLNTQLTLFQAEDSLSQAQLARLQAIVSLYQALGGGWEPRMERPANAL*