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SCN18_25_1_16_R2_B_scaffold_454_6

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 4042..4734

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RL1_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 230.0
  • Bit_score: 432
  • Evalue 2.30e-118
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 230.0
  • Bit_score: 432
  • Evalue 6.50e-119
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 230.0
  • Bit_score: 432
  • Evalue 3.20e-118

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAATCGGAAAGCGCACAAAGAAAGCCCGCGAAGGCATTGACCGCGAGAAGCTTTATCCGATCGCGGAAGCGATCAAGCTGATCAAGGAACGCGCCACCTCGAAGTTCGACGAGACCATCGAGATCGCGATGAATCTCGGTGTCGATCCGCGTCACGCCGACCAGATGGTCCGCGGCGTCGTCAATCTGCCGAACGGCACCGGCCGCACGCTGCGCGTCGGCGTGTTCGCGCGCGGCGCCAAGGCCGAGGAAGCCAAGGCTGCGGGCGCCGATGTCGTCGGCGCCGAAGACCTCGTCGAGAAGGTCCAGGGCGGCACGATCGATTTCGATCGCTGCATCGCGACCCCTGACATGATGCCGCTGGTTGGCCGTCTGGGTAAGGTGCTCGGCCCGCGCGGCATGATGCCGAACCCGAAGATCGGCACCGTGACCATGGACGTCGCCGGCGCTGTGAAGGGTGCCAAGGGCGGTTCGGTGGAATTCCGCGTCGAGAAGGCCGGCATCGTGCAGGCCGGTATCGGCAAGGCATCGTTCTCGGAGGAAAAGCTTGTCGAGAACGTCAAGGCGCTCGCCGATGCGGTCGCCAAGGCCAAGCCCGCCGGCTCCAAGGGTACCTACATCCAGCGCGTCGCGGTGTCCTCGACCATGGGCCCCGGCGTCAAGGTCGAGCCGGGAACCGTGCTCGGCTGA
PROTEIN sequence
Length: 231
MAIGKRTKKAREGIDREKLYPIAEAIKLIKERATSKFDETIEIAMNLGVDPRHADQMVRGVVNLPNGTGRTLRVGVFARGAKAEEAKAAGADVVGAEDLVEKVQGGTIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAGAVKGAKGGSVEFRVEKAGIVQAGIGKASFSEEKLVENVKALADAVAKAKPAGSKGTYIQRVAVSSTMGPGVKVEPGTVLG*