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SCN18_26_2_15_R1_P_scaffold_173_26

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(24345..25214)

Top 3 Functional Annotations

Value Algorithm Source
Putative Transcriptional regulator n=6 Tax=Vibrio nigripulchritudo RepID=U4KDX9_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 287.0
  • Bit_score: 141
  • Evalue 7.80e-31
putative Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 287.0
  • Bit_score: 141
  • Evalue 2.20e-31
Putative Transcriptional regulator {ECO:0000313|EMBL:CCO61286.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 287.0
  • Bit_score: 141
  • Evalue 1.10e-30

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
TTGAGCGCGGACAAACCGATCGATTTCGATGAGGATCTGCCATTCCGGGACCGGACGGCAGCCGTGAACCTGTTTCCCGCCGAGCGCCGCATCGTCGATCATTTGCTCGCGATCCCGGCCTATGAGCTCGGCATCATGACGTCATCCGATCTGTCGGAGCATTCGGGCGCCAGTCGCTCGAGCATAGATCGGCTGTCGCGCAAGCTCGGCTACCCCGGCCTCAAGGAAATGCGCAAGGCGCTGCTGTTGCAGGAGGCTCGCCAAGCCGGTTTTACCCGCAGGGAAGGGGGCGCCGAACGCGCCGGCGATATCGCCAGGCGGGTCATGTCGGCGATTGCTGCCCGCTCCGAGGCGATGGCGCGCAGCCTGGGCGACAGCGCGGATCTCGACCGCCTTGTCGACTGGCTTGTCGATGCCCGCGCGATAAATCTGTTTGGTGCCGGCGAGTCGGCTGCCACATGCAGCGCCATCTATATGCGCCTGGTTAGGCTCGGCTTGCCCGTCAATTTCGCCGACGAATACCATACGCAGGTAACCCTGGCCTCGTTGATGAAGCCGGGCGATGTCGCCCTGGCGGTGTCCTTTTCCGGCGGTACAAAGTCGACCATCTGGGCATCGCAGACCGCAAGGCACAACGGCGCCAGGCTGGTGACGATCACCGGCGCGCCACATTCCGTCCTGGCGAAGCAGGCCGATGTCAACATATCCTTGCCTACCGGCGGAGGGTTGCCAGGCAGCGCCGAGGTTCTGGACAGGGTCGTGGCCGCCGGCATCGCCGAGGTCCTGTTCCAATGCCTGGTGGCCAGGGTGCCTGACCTGCTCGCCAATTCCGTCAGGATCGATGATACGTTCAACGAGGCGCGGATCTGA
PROTEIN sequence
Length: 290
LSADKPIDFDEDLPFRDRTAAVNLFPAERRIVDHLLAIPAYELGIMTSSDLSEHSGASRSSIDRLSRKLGYPGLKEMRKALLLQEARQAGFTRREGGAERAGDIARRVMSAIAARSEAMARSLGDSADLDRLVDWLVDARAINLFGAGESAATCSAIYMRLVRLGLPVNFADEYHTQVTLASLMKPGDVALAVSFSGGTKSTIWASQTARHNGARLVTITGAPHSVLAKQADVNISLPTGGGLPGSAEVLDRVVAAGIAEVLFQCLVARVPDLLANSVRIDDTFNEARI*