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SCN18_26_2_15_R1_P_scaffold_301_22

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(25111..26940)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDE2EC related cluster n=1 Tax=unknown RepID=UPI0003CDE2EC similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 600.0
  • Bit_score: 818
  • Evalue 3.90e-234
Polysaccharide biosynthesis protein GtrA {ECO:0000313|EMBL:ESW77537.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 600.0
  • Bit_score: 818
  • Evalue 5.50e-234
putative membrane protein, required for N-linked glycosylation similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 602.0
  • Bit_score: 776
  • Evalue 3.70e-222

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1830
ATGAGCACGGCCAAGGACAGCGGCGCCGCGAGCTGGCGGTTCGACCTGATGCTGGTGTTGGCCGCCACGCTGGTGGCGTTCCTTGTCAACGCGATGTCGGGCTTTCCCGAGCTCGCCAATGCCCGGGGCGACAATGACAGCCTGCTGCAGCTGGTGCAGGTCCGCGACCTGCTGGGCGGCCAGGGCTGGTTCGACATGCATCAGTACAGGATGGGCCTGGAAGGCGGCTTCGTCATGCACTGGTCGCGTCTGCTCGACGCGCCGCTGGCGCTCGGCATGCTTGCCGCCTCCGCCGTGACCGGAAACATGCCGCTGGCCGAGCAGGTGGTCCAGGTCCTGTGGCCGGCCCTGCTGTTCATGCTGACGCTGTTCTTCACAGTGCGCGCCGCGCGCCGCTTCGGCGGTGCTCCCGCGGTCCTGCCCGCCGTCGTGATCGGCGCAGCCGCCTATCATTTCGTCGGCATCTACTCGCCCGGTTCGCTCGACCATCACAACGTCCAGCTGATGCTGATCATGGCAAGCCTCAGCCTGCTGCTCGGCACGCCCGTGCGCGGGCCGGCGGCCTTCGCGGCGGGCGTGTGCGCCGCGCTGTCCATGGCCATCGGTATGGAAAGCCTGCCTTCAGCCGGCTCGATCGGCGCCGTCGTGGCGCTGCTGTTCCTCTTCGATGGCGCCCAGGAACGGCTCGTCGCCAGGTATTTCGGCCTCGGCGTCGCCGCGCTCGCCGCCTTCGCCTTCGTCACCACCGTGCCGATGTCCGCCTGGGGTCAGGCCCAGTGCGATGCGTATTCGGTCGTGCAGTTCGTCGTCGCCGCGCTGGCCGGCGCGGGCCTGGCCGCGTTGGCCACCCTCGACGCGGCCGCCCGCGACCGCCAGCGCCGGCTCGTCTCGCTCGGCCTGCTGGCCGTCGCCATCGGCGCCGTCGTGGTCCTGTTCTTCCCGCAATGCCTGGCCGCGCCCTACGCCACGCTCGACCCGCGCCTCAAGGAGATGTGGCTCGATCATATCGACGAGGCCCAGTCGCTGCGCCAGCTCGTGTTCGAAAGCCCGGCTTCGGTGATGGCGCGCTATGCGACGCCGGCGGTGGCGCTGGTGCTGATGGCGCTGCGCCTGCGCCGTGGCCCGTGGCGGCGCCAGGAAAGCCTGGTCGGCGCGCTGCTGCTGGTGGCGTTCCTGGTCAGCGTCTGGCAGGTGCGCGGCTCGACCTTCTCGATAGCCTTCGCCGTCATTCCGCTATCGGCGTGGATCGCGCAGTGGCGCGAACGGGCAAGGACCAACCCGTCGCGCGGCGTCGCCCTGCGCATGGCCGCGGTCTGGCTGGTTTCCGTCAACGCGGTCTGGACCGGCGCCGCCGCCGCGGCGTCGATCGCGCTGGAGGGCAAGAAGACGCCGGCCACGACCGAGGGAGGCGTCAAGGTCGACATCGCCTGCGAGGCCAAGGCCACCTACGCGACGCTTGCCCGGCAGCCAAATACGGTGGTGCTGGCGGTCTCCAATCTCGGATCGCCGATCCTCGCCTATTCCGGGCATCGCGTCTTCGCCGGTCCCTATCACCGCAACATCGCCGGCGACCTCGCGGCCCTCGATGCCTTCATGGGGTCGGCCGACGGTGCCAGGGCGATCGTCGAGGCGCACCATGTCGGCCTCGTCGCGGTCTGCCCGACCAATGGCGAGACCAAGCTCCTGACCGGAAAGGCACCGGCTGGCTTCATGGCCGAGCTTGTGCGCGGCGTGGTGCCTGCCTGGCTGGAGTCTGTCCCGGGCACGCTTGCCGGCCCTCTGCAGCTCTACCGTGTCAAGGCCGTTGGCGCCGAGGGTGGTGCCACCTGA
PROTEIN sequence
Length: 610
MSTAKDSGAASWRFDLMLVLAATLVAFLVNAMSGFPELANARGDNDSLLQLVQVRDLLGGQGWFDMHQYRMGLEGGFVMHWSRLLDAPLALGMLAASAVTGNMPLAEQVVQVLWPALLFMLTLFFTVRAARRFGGAPAVLPAVVIGAAAYHFVGIYSPGSLDHHNVQLMLIMASLSLLLGTPVRGPAAFAAGVCAALSMAIGMESLPSAGSIGAVVALLFLFDGAQERLVARYFGLGVAALAAFAFVTTVPMSAWGQAQCDAYSVVQFVVAALAGAGLAALATLDAAARDRQRRLVSLGLLAVAIGAVVVLFFPQCLAAPYATLDPRLKEMWLDHIDEAQSLRQLVFESPASVMARYATPAVALVLMALRLRRGPWRRQESLVGALLLVAFLVSVWQVRGSTFSIAFAVIPLSAWIAQWRERARTNPSRGVALRMAAVWLVSVNAVWTGAAAAASIALEGKKTPATTEGGVKVDIACEAKATYATLARQPNTVVLAVSNLGSPILAYSGHRVFAGPYHRNIAGDLAALDAFMGSADGARAIVEAHHVGLVAVCPTNGETKLLTGKAPAGFMAELVRGVVPAWLESVPGTLAGPLQLYRVKAVGAEGGAT*