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scn_reactorb_scaffold_57584

Search features with annotation key words

Displaying items 31-60 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_57584_31
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32896..33534
DNA (639bp) protein (213aa)
threonine transporter RhtB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036808FF
Lysine exporter protein {ECO:0000313|EMBL:GAD24087.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
lysine exporter protein LysE/YggA
scn_reactorb_scaffold_57584_32
unknown

Not on your lists

comp(33470..33922)
DNA (453bp) protein (151aa)

This feature has no annotations

scn_reactorb_scaffold_57584_33
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33930..35432)
DNA (1503bp) protein (501aa)
Extracellular solute-binding protein family 5 n=2 Tax=Alicycliphilus denitrificans RepID=E8U0Y8_ALIDB
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADU98739.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_57584_34
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35502..36350)
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Acidovorax RepID=A1W4F7_ACISJ
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACM32297.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_57584_35
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36343..37305)
DNA (963bp) protein (321aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0Z2_ALIDB
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU98743.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_57584_36
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37434..37688
DNA (255bp) protein (85aa)
ferredoxin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003600D86
4Fe-4S ferredoxin {ECO:0000313|EMBL:GAD24078.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
4Fe-4S ferredoxin
scn_reactorb_scaffold_57584_37
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37752..38363)
DNA (612bp) protein (204aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T375_ACIDE
scn_reactorb_scaffold_57584_38
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(38464..39090)
DNA (627bp) protein (209aa)
50S ribosomal protein L25 n=2 Tax=Acidovorax RepID=RL25_ACIET
50S ribosomal protein l25/general stress protein ctc
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_57584_39
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39209..40168)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T373_ACIDE
scn_reactorb_scaffold_57584_trna_2
unknown

Not on your lists

comp(40220..40293)
DNA (74bp)
transferRNA Gln
scn_reactorb_scaffold_57584_40
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40333..41190)
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003604DBD
scn_reactorb_scaffold_57584_41
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41195..41647)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003786918
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
outer membrane lipoprotein LolB
scn_reactorb_scaffold_57584_42
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41668..43449)
DNA (1782bp) protein (594aa)
TPR repeat-containing protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4G5_ACISJ
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABM41140.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_57584_43
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43468..44283
DNA (816bp) protein (272aa)
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6X7_9BURK
scn_reactorb_scaffold_57584_44
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44364..46310
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377475
Dynamin family protein {ECO:0000313|EMBL:KJA09909.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_57584_45
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46310..47341
DNA (1032bp) protein (344aa)
A/G-specific adenine glycosylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9ME54_ACIET
a/g-specific adenine glycosylase
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACM32308.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_57584_46

Not on your lists

comp(47417..48274)
DNA (858bp) protein (286aa)
UPF0042 nucleotide-binding protein ACD_23C00715G0002 n=1 Tax=uncultured bacterium RepID=K2EH79_9BACT
Nucleotide-binding protein ACD_23C00715G0002 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scn_reactorb_scaffold_57584_47
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48280..49944)
DNA (1665bp) protein (555aa)
DNA repair protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380A97E
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
DNA repair protein RecN
scn_reactorb_scaffold_57584_48
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49947..50843)
DNA (897bp) protein (299aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYC0_9BURK
Tax=GWA2_Burkholderiales_64_37_curated
scn_reactorb_scaffold_57584_49
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50872..51876
DNA (1005bp) protein (335aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYB9_9BURK
hrcA; heat-inducible transcription repressor
Tax=GWA2_Burkholderiales_64_37_curated
scn_reactorb_scaffold_57584_50
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52632..53099)
DNA (468bp) protein (156aa)
Putative membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KHW2_9BURK
Membrane protein {ECO:0000313|EMBL:KJA10286.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_57584_51
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53184..53924
DNA (741bp) protein (247aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
Peptidase M15D, vanX D-ala-D-ala dipeptidase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J6N0_COMT2
peptidase M15D, vanX D-ala-D-ala dipeptidase
scn_reactorb_scaffold_57584_52
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54023..55075
DNA (1053bp) protein (351aa)
nifR3 family TIM-barrel protein; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] id=12552559 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tim-barrel protein, nifr3 family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_57584_53
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55072..55311
DNA (240bp) protein (80aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C8846
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_57584_54
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55394..56992
DNA (1599bp) protein (533aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQJ8_ALIDB
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_57584_55
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57154..58155
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AF1B8
Uncharacterized protein {ECO:0000313|EMBL:GAD23751.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transcriptional regulator, AraC family
scn_reactorb_scaffold_57584_56
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58255..60465
DNA (2211bp) protein (737aa)
UPI0003A97FC0 related cluster n=1 Tax=unknown RepID=UPI0003A97FC0
Uncharacterized protein {ECO:0000313|EMBL:GAD23750.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
TonB-dependent receptor
scn_reactorb_scaffold_57584_57
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60465..61127
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C5E7B
Uncharacterized protein {ECO:0000313|EMBL:GAD23749.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_57584_58
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61076..62101
DNA (1026bp) protein (342aa)
UPI0003D3CFB1 related cluster n=1 Tax=unknown RepID=UPI0003D3CFB1
Uncharacterized protein {ECO:0000313|EMBL:GAD23749.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_57584_59
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62098..63678
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003743D19
Putative multicopper oxidases {ECO:0000313|EMBL:GAD23748.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
putative multicopper oxidase
Displaying items 31-60 of 135 in total

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