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scn_reactorb_scaffold_5360_25

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(27295..27621)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Burkholderia sp. BT03 RepID=J2IZ92_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 100.0
  • Bit_score: 144
  • Evalue 4.50e-32
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EUC16370.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 100.0
  • Bit_score: 144
  • Evalue 6.30e-32
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 100.0
  • Bit_score: 139
  • Evalue 3.10e-31

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Taxonomy

Burkholderia sp. BT03 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
GTGGCCACGCGCGTGCTGGCCAACCACTGGCGCCGCGAACAGCTGGAGCGTGCCTACCTGGAGACACTGCGCCACCTGCCGCAGGCGCTGGCGCCTTCCCCCGAGGAGCGCGCCCTGCTGCTGGAGGCGCTGTGCGAGATCGACGCGCTGCTCGACGGCCTGCCGGTGCCCGCCAAGCGCGCCTTCCTCTTCAGCCAGCTCGACGGGCTCACGCAGGCGCAGATTGCCGAGCGGCTCGGCGTGACCGAGCGCACCGTGCGCCGCTACCTCACCCAGGCCGCCGAAACCTGCTTCTTCGCGGACGTGCTGGGCCGCGCGCGGGCATGA
PROTEIN sequence
Length: 109
VATRVLANHWRREQLERAYLETLRHLPQALAPSPEERALLLEALCEIDALLDGLPVPAKRAFLFSQLDGLTQAQIAERLGVTERTVRRYLTQAAETCFFADVLGRARA*