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scn_reactorb_scaffold_5360_41

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(38468..38608)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FecI 17 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJK8_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 44.0
  • Bit_score: 70
  • Evalue 2.70e-10
RNA polymerase sigma factor FecI similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 44.0
  • Bit_score: 70
  • Evalue 7.60e-11
RNA polymerase sigma factor FecI {ECO:0000313|EMBL:KGK59377.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 46.0
  • Bit_score: 70
  • Evalue 3.80e-10

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Taxonomy

Xanthomonas sp. Nyagatare → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GTGCCAACCACCGACACCACGCTGCGCCAGCAGTGCATCGAAGGGCTCTATGCCGACCACCATGGCTGGCTGAAGGCCTGGCTGCGCCGGCGGCTGGGCGATTCCTTCGCCGCCGCCGACCTGGCGCACGACACCTTCTGA
PROTEIN sequence
Length: 47
VPTTDTTLRQQCIEGLYADHHGWLKAWLRRRLGDSFAAADLAHDTF*