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scn_reactorb_scaffold_6725_100

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(107174..108361)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARZ1_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 486
  • Evalue 1.80e-134
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 486
  • Evalue 5.00e-135
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEF87777.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 383.0
  • Bit_score: 486
  • Evalue 2.50e-134

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGTGGCAACGACGACGGTGCATCGGGAGGGGCCTTGGCGGCTGGTGGCCGCTGCGGCCTTGGCGGTGCTGGTGGCAGGCTGCGGGCAGGGCCAGCCTTCTGGCAACGGGCAGGATGCGGAACCTGTGGCCGTGGACGTGGTGGCGGTGCAGCCGCAGCCGCTGCCGGTGCGCAGCGAGTTGCCGGGCCGGGTGGAGCCGATGCGCCTGGCCGAGGTGCGGGCGCGGGTGGCGGGCATCGTGCTCGGCCGCCATTTCCAGGAAGGCGCGGACGTCAAGGCGGGGGATGTGCTGTTTTCCATCGACCCGGCGCCGCTGCGCACGGCGCTGGCGCGCGCCCAGGGCGAGCTGGCGCGGGCCGAGGCGGCCTTGGGCGAGGCGCAGGCGCTGGTGCGCCGCTATGCGCCGCTGGCGGAGGTCGAGGCCGTGAGCCGGCAGGACTTCGAGACGGCCCAGGCCGGCCTGCGCAGCGCCCAGGCGGTGCGCCAGTCGGCGCAGGCCGAGGTGGACGCAGCCCGGCTGAACCTGGCGTACGCCACGGTCAGGGCGCCGATCTCCGGGCGCATCGGCCGCGCCCTGGTGAGCGAAGGCGCCCTGGTGGGCCAGGGCGAGGCCACGCCGATGGCCGTCATCCAGCAACTGCACCCCATCTACGTCGACTTCCAGCAGCCGCTGGCCGAGGCCCAGCAGTGGCGTGCTGCCATGGCCCAGGGGCAACTGATGCCGCACGCGGGCCAGGGCGCCCAGGTCACGCTGACGCTTGACGGCGCCGGGCTGCAGCGCGAGGGGCGCCTGCTGTTCTCCGATGCGACGGTGGACCGCCAGACCGGCCAACTGGCGTTGCGCGGCCAGTTCGACAACCGCGACGCCGCGCTGCTGCCCGGCATGTACGTGCGGGTGGGCATGCGCCAGGGCGTGAACCCGTCCGCCATCCTCGTGCCGCAGCGGGCGGTGCGGCGCGATGCCGAGGGCAAGGCACGGGTCATGGTGGTGGATGCGCAGGGTGTGGTGCAGGCGCGGCCCGTGCAGACCGGCGCCATGCAGGGCGCGCAATGGCACATCAAGCAAGGGCTGAAGCCGGGCGAGCTGGTGGTGGCGGGGCGCCTGGCGGCCGCGCAGCCGGGCGCCAGGGTCAAGCCCGAGGTGGTGGCCGATGCCGCGGCGGGCCTTGGCGTGGCCGAGGAATAG
PROTEIN sequence
Length: 396
MVATTTVHREGPWRLVAAAALAVLVAGCGQGQPSGNGQDAEPVAVDVVAVQPQPLPVRSELPGRVEPMRLAEVRARVAGIVLGRHFQEGADVKAGDVLFSIDPAPLRTALARAQGELARAEAALGEAQALVRRYAPLAEVEAVSRQDFETAQAGLRSAQAVRQSAQAEVDAARLNLAYATVRAPISGRIGRALVSEGALVGQGEATPMAVIQQLHPIYVDFQQPLAEAQQWRAAMAQGQLMPHAGQGAQVTLTLDGAGLQREGRLLFSDATVDRQTGQLALRGQFDNRDAALLPGMYVRVGMRQGVNPSAILVPQRAVRRDAEGKARVMVVDAQGVVQARPVQTGAMQGAQWHIKQGLKPGELVVAGRLAAAQPGARVKPEVVADAAAGLGVAEE*