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scn_reactorb_scaffold_6725_103

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(109542..111011)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 470.0
  • Bit_score: 865
  • Evalue 1.90e-248
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ2_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 470.0
  • Bit_score: 865
  • Evalue 1.30e-248
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 470.0
  • Bit_score: 865
  • Evalue 3.80e-249

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAGCGAAACGAACAAAGACGACCGTGCGGCCCTGCTGGCCGACGCGGCAGGCCCCGCAACCGAACTGCCGCCGGGCTGGCTCGAGGTGGTGTCCATGGACATGGACGCCCAGGGCGTGGCGCGCAAGCCCGATGGCAAGGTGGTGTTCATCGACGGCGCCCTGCCCACCGAATGGGTCAGTGCCAACACCCACCGCAAGAAGAACAACTGGGAGGCCGCCAGCCTGACGGCGATCCACCGCGAATCCGCCCAGCGTGTGCGGCCGGGCTGTCCGCACTTCGGGCTGCACGCGGGCGCCTGCGGAGGCTGCAAGATGCAGCATCTGCACGTCGGCGCCCAGGTGGCCGTCAAGCAGCGCGTGCTGGAGGACAACCTCTGGCACCTGGGCAAGGTCAAGGCCGAGACCATCCTGCGCCCGATCGAGGGCCCCGCGTGGGGCTACCGCTACCGCGCGCGCCTGTCGGTGCGGTTCGTGCCCAAGAAGGGCGTGGTGCTGGTGGGCTTCCACGAGCGCAAGAGCCGCTACATCGCCGACATGCAGACCTGCAAGATCCTGCCGCCGCACGTCGATGCCATGCTGATGCCGCTGCGCGCGCTGATCGGCGCGCTGCAGGCGCGCGACACCTGCCCGCAGATCGAACTGGCCTGCGGCGACACGGTGACGGCCCTGGTGTTGCGCCACCTCGAGCCGCTGGGCGAGGGCGACCTGGCCAGGCTGCGCACCTTCGCCGCCGAACATGGCGTGCAATGGTGGCTGCAGCCCAAAGGGCCCGATACGGTGCACTTGCTGGATGCCGAGGGCGCGGCGCAACTGGCCTACGGCCTGCCGGACTTCGGCATCACCATGCCGTTCAAGCCGACCGACTTCACGCAGGTGAATCCGCACATCAACCGCGTCCTGGTGACGCGCGCGCTGCGCCTGCTGGATGCCCGGAAGACCGAGCGCGTGATCGACTGGTTCTGCGGCCTGGGCAACTTCACCTTGCCGATCGCCACGCAGGCGCGCGAGGTGCTGGGCATCGAGGGCAGCGAGGCCCTGGTGGCGCGCTCGCGCGAGAATTATGAGAAAAATCAGGCCCAAAGGTCCACGCAGCAAGCGCTGGCAGCTACCAGTTTCGTAGCGCGCAACCTGTTCGAGATGACACCGGAGATGCTGGTGGCCGATGGCACGGCCGACAAATGGCTGGTCGATCCGCCGCGCGAAGGGGCGTTTGCCTTGTCGAAGGCACTGGCCGACATCCACCAGGCGCGCCTGGGCGCCGAGGGGGCGCCGCCCTTGCCTGCGGGCGCCGCGCACTGGGCGCCGCCCCAGCGCATCGTGTACGTGAGCTGCAATCCCGCCACCCTGGCGCGCGATGCGGGGCTGCTGGTGCACCAGGCGGGATACCGCTGCGTGGCGGCGGGAGTGGTCAACATGTTCCCGCACACGGCACACGTCGAAAGCATGGCCGTCTTCGAGCGCGCCTGA
PROTEIN sequence
Length: 490
MSETNKDDRAALLADAAGPATELPPGWLEVVSMDMDAQGVARKPDGKVVFIDGALPTEWVSANTHRKKNNWEAASLTAIHRESAQRVRPGCPHFGLHAGACGGCKMQHLHVGAQVAVKQRVLEDNLWHLGKVKAETILRPIEGPAWGYRYRARLSVRFVPKKGVVLVGFHERKSRYIADMQTCKILPPHVDAMLMPLRALIGALQARDTCPQIELACGDTVTALVLRHLEPLGEGDLARLRTFAAEHGVQWWLQPKGPDTVHLLDAEGAAQLAYGLPDFGITMPFKPTDFTQVNPHINRVLVTRALRLLDARKTERVIDWFCGLGNFTLPIATQAREVLGIEGSEALVARSRENYEKNQAQRSTQQALAATSFVARNLFEMTPEMLVADGTADKWLVDPPREGAFALSKALADIHQARLGAEGAPPLPAGAAHWAPPQRIVYVSCNPATLARDAGLLVHQAGYRCVAAGVVNMFPHTAHVESMAVFERA*