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scn_reactorb_scaffold_4422_62

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(62228..62683)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIC1_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 130.0
  • Bit_score: 149
  • Evalue 2.00e-33
DNA-binding protein {ECO:0000313|EMBL:KJA11915.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 129.0
  • Bit_score: 217
  • Evalue 1.10e-53
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 130.0
  • Bit_score: 158
  • Evalue 1.20e-36

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGAACGAGAAGATCGAGTTCTCCCGGCGCCTGCGCGACGCCATGCAGCACGCCGGGTACGCCGCCAGCCCCTCGGTGCTGGAGCACGAGTTCAACCTGCGCTGGTACGGGCGCTCCATCAGCAACCAGGCCGCCTGGAGCTGGCTCAACAGCCGCTCGCTGCCCACGCAGGACAAGCTGCAGGTGCTGGCCGAATGGCTCAAGGTGGCGCCAGAAGTGCTGCGCTTCGGTGAAGCCGTACGCAAGTCGGTGCTGGCCCATCGCCAGCGCTGGCACGAAGGCGTGGGCCATCTGGAGCGCGAAACCATCGACGCCTTCCTGCAACTGCCAGCCCCGCAGCGCAAGCTGATCCGCGAGGTGGTGCTGACGTTCGCACGGGTGCACGGCGCCTGGGAGGAGCCTGTGGAACCCGCCGCGGTGACGGCGGCCATGCACCCAAGCACTCAAAAACCATAG
PROTEIN sequence
Length: 152
MNEKIEFSRRLRDAMQHAGYAASPSVLEHEFNLRWYGRSISNQAAWSWLNSRSLPTQDKLQVLAEWLKVAPEVLRFGEAVRKSVLAHRQRWHEGVGHLERETIDAFLQLPAPQRKLIREVVLTFARVHGAWEEPVEPAAVTAAMHPSTQKP*