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scn_reactorb_scaffold_2650_15

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(12440..13852)

Top 3 Functional Annotations

Value Algorithm Source
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=12549540 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 460.0
  • Bit_score: 842
  • Evalue 1.20e-241
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosomal protein S12 methylthiotransferase RimO; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 458.0
  • Bit_score: 842
  • Evalue 2.80e-241
rimO; ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 460.0
  • Bit_score: 833
  • Evalue 2.00e-239

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGAATTCAAATGCTTACGACGCAGCCGCGACTTCTGCGGCCGCCAAGACACCCAAGGTCGGGTTCGTCTCCCTCGGATGCCCGAAGGCGCTCACCGACTCCGAACTCATCCTCACGCAGCTCTCCGCCGAGGGCTACCAGACCTCCAAGACGTTCGAGGGCGCGGACCTGGTGATCGTCAACACCTGCGGCTTCATCGACGATGCCGTGAAGGAAAGCCTCGACACCATCGGCGAAGCGCTGGCCGAGAACGGCAAGGTCATCGTCACCGGCTGCCTGGGCGCGCGGGCCGACGATGGCGGCGGCAACCTGGTGAAAGGCGTGCACCCGAGCGTGCTGGCCGTCACGGGCCCGCATGCCACGCAGGAGGTGATGGAGGCCGTCCACACCCACCTGCCCAAGCCGCACGACCCGTTCCTCGACCTGGTGCCCGGCGCCTTTGGCGAGGCGGGCATCAAGCTCACGCCGCGCCACTATGCCTACCTCAAGATCAGCGAGGGCTGCAACCACCGCTGCACGTTCTGCATCATCCCCTCGATGCGCGGCGACCTGGTGTCGCGCCCCGTGGGCGACGTGCTCAAGGAGGCCAAGGCGCTGTTCGAGGGCGGGGTGAAGGAGCTGCTGGTCATCAGCCAGGACACCTCGGCCTACGGCGTGGACATGAAGTACCGCACCGGCTTCTGGGATGGCAAGCCGGTCAAGACACGGACGCTGGAGCTGGTGCGCACGCTGGGCGAGATTGCCGCGCCCTACGGCGCCTGGGTGCGCCTGCACTACGTATACCCGTACCCGAGCGTGGACGAGATCATTCCGCTCATGGCCGAAGGGCTGGTGCTGCCCTACCTGGACGTGCCCTTCCAGCACAGCCACCCCGACGTGCTCAAGCGCATGAAGCGCCCGGCCAGCGGCGAGAAGAACCTCGAGCGCATCCAGCGCTGGCGCGCCATGTGCCCGGACCTGGTGATCCGCAGCACCTTCATCGCCGGCTTCCCCGGCGAGACGGAAGAAGAATTCCAGCACCTGCTCGACTTCATGCGCGAGGCGCAGATCGATCGTGCGGGCTGCTTCGCCTACAGCGATGTGCATGGCGCCGACGCCAACCACCTGCCCGGCATGCTGCCGCAGGAGGAGCGCGAGGCGCGGCGCGCGCGCTTCATGGCCGTGGCCGAGGAGGTCTCCACCGCCAAGCTGCGCGGCCGTGTGGGCGCCACCATGCAGGTGCTGGTGGACCATGCCCCGGCCATGGGCCGCAAGGGCGGGCGCGGGCGCAGCTATGCCGACGCCCCCGAGATCGATGGCGTGGTGCACCTGCTGCCGCCCGAGAAGATCAGCAAGCAATTCAAGGTGGGCGACTTCGTACGCGCGCGCATCGTCCAGGCGCAGGGGCATGACCTCGTTGCGCAGCCGGTCTGA
PROTEIN sequence
Length: 471
MNSNAYDAAATSAAAKTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFIDDAVKESLDTIGEALAENGKVIVTGCLGARADDGGGNLVKGVHPSVLAVTGPHATQEVMEAVHTHLPKPHDPFLDLVPGAFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGDVLKEAKALFEGGVKELLVISQDTSAYGVDMKYRTGFWDGKPVKTRTLELVRTLGEIAAPYGAWVRLHYVYPYPSVDEIIPLMAEGLVLPYLDVPFQHSHPDVLKRMKRPASGEKNLERIQRWRAMCPDLVIRSTFIAGFPGETEEEFQHLLDFMREAQIDRAGCFAYSDVHGADANHLPGMLPQEEREARRARFMAVAEEVSTAKLRGRVGATMQVLVDHAPAMGRKGGRGRSYADAPEIDGVVHLLPPEKISKQFKVGDFVRARIVQAQGHDLVAQPV*