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scn_reactorb_scaffold_5873_11

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 8957..12802

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 1283.0
  • Bit_score: 2351
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=RPOC_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 1283.0
  • Bit_score: 2351
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 1283.0
  • Bit_score: 2351
  • Evalue 0.0

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3846
ATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAAGCCTACGTGGTGACCGACCCCGGCATGACCCCGCTGAAGAAGTTCAGCATCATGAGCGAGGACGACTACGACGCCAAGTGCCGCGAGTACGGCGATGAATTCGTCGCCAAGATGGGCGCCGAGGGCATCAAGGACCTGCTCGAAGGCATCGACATCGACACCGAGATCGAGCGCCTGCGCGGCGACCTGACCGGCTCCGAGGTCAAGGTCAAGAAGAACGCCAAGCGGCTCAAGGTGCTCGAAGCGTTCAGGAAGTCTGGCATCAAGCCCGAGTGGATGGTGCTCGACGTGCTGCCTGTGTTGCCGCCGGACCTGCGTCCGCTGGTGCCGCTGGATGGCGGCCGCTTCGCCACGTCGGACCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACTCGCGCCTGCGCCGCCTGCTGGAGCTGAAGGCGCCCGAGATCATCGCGCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTGGACAGCCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACGGGCGCGAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTGATCACCGTGGGCCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTCGAAGCCATGGGCATCGCCACGACGATCAAGGCCGCGAAGAAGGAAGTGGAAGCCGGCACGCCGGTGGTGTGGGACATCCTGGAAGAGGTCATCAAGGAGCACCCGGTGCTGCTGAACCGCGCGCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCCATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTCCCCCTGTCGGTGGAAGCGCAGATGGAAGCCCGCACGCTGATGCTGGCCTCCAACAACGTGCTGTTCCCGGCCTCGGGCGAGCCGTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTGTACCACGCCACGCGCGACAAGATCAACGGCAAGGGCGAGGGCCTGGTGTTCGCCGACACCGGCGAAGTCCAGCGCGCACTCGACGCGGGCGAGGCCGAGCTGCACGCCAAGATCAGCGTGCGCCTGACCGAGTGGACCCGCGACAAGGCCACGGGCGAATTCGTGCCCGAGACCAAGCTCGTGGACACCACCGTGGGCCGCGCGCTGCTGAGCGAGATCCTGCCCCGCGGCCTGCCCTTCAGCAACCTGAACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTCATCAACGCCAGCTTCCGCAAGTGCGGCCTGAAGGAAACCGTGGTGTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCGACGCACGCCGGCTTCTCGGTGGCCATCGACGACATGCTGGTGCCGCCGCAGAAGGCCGACATCCTGGCCCGCGCCGAGGCCGAGGTGAAGGAGATCGAGCAGCAGTACGTCTCCGGCCTGGTCACGTCGGGCGAGCGCTACAACAAGGTCGTGGACATCTGGGGCAAGGCCGGCGACGACGTGTCCAAGGTGATGATGGACCAGCTCAAGGTGCAGAAGACCATCGACCGCCACGGCAACGAAGTCAACCAGGAGTCGTTCAACGCCATCTACATGATGGCCGACTCGGGCGCGCGGGGTTCTGCCGCCCAGATCCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCGGACGGCTCGATCATTGAAACGCCTATCACCGCGAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCATCTCCACCCACGGCGCCCGCAAGGGCCTGGCGGATACGGCGCTGAAGACCGCGAACTCGGGCTACCTCACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTGAACCAGGAAGACTGCGGCACCAGCAACGGCTCGCTGATGCGCGCCATCGTCGAGGGCGGCGAGGTGATCGAGTCGCTGCGCGACCGCATCCTGGGCCGCACCACGGCAGAGGAAGTGCTGCACCCCGAAACCCGCGCCGTGCTCGCTCCGGCGGGCCGCATGCTCGATGAAGACCTCATTGAGGAGCTGGAAGCCGTGGGTGTGGACGAGGTCAAGGTGCGCACCGCGCTGACCTGCGAAACCCGCTTCGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGCGTGATCGCCGCGCAGTCCATCGGCGAACCCGGCACGCAGCTGACCATGCGCACGTTCCACATCGGCGGCGCCGCTTCGCGCGCCGCCATCGCGTCGAGCGTGGAAGCCAAGTCGAACGGCCTGGTCGCCTTCAACGCCACGATGCGCTACGTCAGCAACACCAAGGGCGAGCTGGTGGTGATCGCGCGTTCCGGCGAGATCATCATCCAGGACGACCATGGCCGCGAGCGCGAGCGCCACAAGGTGCCGTACGGCGCGGTGCTGACCGTCAAGCCCGACGAAGCCATCAAGGCCGGCAAGATCCTGGCCAACTGGGACCCGCTGACGCGCCCGATCATCACGGAATTTGCCGGCCAGGTGAAGTTCGAGAACATCGAGGAAGGCCTCACCGTGGCCAAGCAGGTGGACGACGTGACCGGCCTGTCCACGCTGGTGGTGATCGACCCCAAGCGCCGCGGCTCCGCCAAGGTGGTGCGCCCGCTGGTCAAGCTGGTGGACGCGAACGGCCAGGAGGTGAAGATCCCCGGCACCGACCACTCGGTGGCCATCGGCTTCCAGGTGGGCGCGCTGATCCAGGTGCGCGACGGCCAGGACGTGGGCCCCGGCGAAGTGCTGGCGCGCATTCCGGTCGAAGGCCAGAAGACGCGCGACATCACCGGCGGTCTGCCGCGCGTGGCAGAGCTGTTCGAGGCCCGCACGCCCAAGGACAAGGGCACGCTGGCCGAGATGACCGGCACCATCTCCTTCGGCAAGGAAACCAAGGGCAAGGTGCGCCTGCAGATCACCGACCCGGACGGCAAGGTGTGGGAAGAGCTGATCCCCAAGGAAAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGCACATCGTGGACGGCCCGGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATCGAGGAACTCTCGCGCTACATCGTCGATGAAGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCGGGCGAGTCCAGCTACATCGGCGGCGAGCAGGTCGAGCGCAGCGAGATCCTCAACACCAACGAGGCGCTGCAGGCCGAGGGCAAGATTCCCGCCACGTACTCCAACGTGCTGCTGGGCATCACCAAGGCGTCGCTGTCCACCGACTCGTTCATCTCCGCCGCGTCGTTCCAGGAAACCACGCGCGTGCTCACCGAGGCGGCCATCATGGGCAAGCGCGACGAGCTGCGCGGCCTGAAGGAAAACGTCATCGTGGGCCGCCTGATCCCGGCTGGCACGGGCCTGGCCTACCACCAGGCGCGCAAGGTCAAGGATGCCATGGACGACGCCGAGCGCCGCGCCATCGCCGAGGCCGAAGCCGCCGAGATGGCTGCCGTCACCGAAGGCGCCGATGAGCCCGAGGTGAACGCCCACGCGGGCGACGCCGCCGACTAA
PROTEIN sequence
Length: 1282
MTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKCREYGDEFVAKMGAEGIKDLLEGIDIDTEIERLRGDLTGSEVKVKKNAKRLKVLEAFRKSGIKPEWMVLDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATRDKINGKGEGLVFADTGEVQRALDAGEAELHAKISVRLTEWTRDKATGEFVPETKLVDTTVGRALLSEILPRGLPFSNLNKALKKKEISKLINASFRKCGLKETVVFADKLLQNGFRLATHAGFSVAIDDMLVPPQKADILARAEAEVKEIEQQYVSGLVTSGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRHGNEVNQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVNQEDCGTSNGSLMRAIVEGGEVIESLRDRILGRTTAEEVLHPETRAVLAPAGRMLDEDLIEELEAVGVDEVKVRTALTCETRFGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGLVAFNATMRYVSNTKGELVVIARSGEIIIQDDHGRERERHKVPYGAVLTVKPDEAIKAGKILANWDPLTRPIITEFAGQVKFENIEEGLTVAKQVDDVTGLSTLVVIDPKRRGSAKVVRPLVKLVDANGQEVKIPGTDHSVAIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARTPKDKGTLAEMTGTISFGKETKGKVRLQITDPDGKVWEELIPKEKNILVHEGQVVNKGEHIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGESSYIGGEQVERSEILNTNEALQAEGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDDAERRAIAEAEAAEMAAVTEGADEPEVNAHAGDAAD*