ggKbase home page

scn_reactorb_scaffold_5044_6

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 9238..12627

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein TadD n=1 Tax=Acidovorax sp. CF316 RepID=J1EGW4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 1122.0
  • Bit_score: 1246
  • Evalue 0.0
exported protein, TonB-dependent receptor protein similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 596.0
  • Bit_score: 171
  • Evalue 1.30e-39
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 1126.0
  • Bit_score: 1278
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3390
ATGCGCCAGCATCTTCTGGGGTTCGCCCCATGGCTTCTGACCCTGTCCAACGCGTTCGCCCAGGGCAGCGGCTGCCAGGCGCCACCCGGGGCCGATGGCAGCGCCGCCGAGATCGTCGCCCTGAGCGGCCAGGGCCAGGCGCGCGCCGACGGCGCCGCGCCCTGGGCCGCCGCCGCGCTGGCGCAGCGCCTGCCGCCGGGGGCCGAGGTGCGCACCCTGGCGCTGTCCTCCGCGGCCTTGCTGCTGGCCGACCGCACGCAGATCCGCCTGGCCGCGCAGGCCCAGGTGCGGCTGTGCGACGCGCGCCCGGCGCAAACCCGGCTGGAGCTGGCCGTGGGCCGCCTGTGGGCGCGTGCCAAGGGCCAGGGCGTGAACGTGGAGCTGCGCACCCCGGCGGTGCTGGCGGCGGTGCGCGGCACGGATTGGGACGTGGAGGTCGATGCCCAGGGGCGCACCACGCTCACCGTGCTGTCCGGGCGCATCGACGTGTCCAACGCCCAGGGCGCGGTGGTGCTCGGGCCGTCCGAGCAGGCCGTGGCCGAACCCGGCCAGGCCCCCGTCAAGCGCCTGCTGGTGCGCCCGCGCGAGCGCGTGCAGTGGGTCATGGCGCCCGCGCTCACGCCCCCGGGCTGGCCCGAACTGGCCGACGCCACGGCGCCCGGTGCCGCCTGGCGCGCCCCGGCGCTGCAGGCGCTGCGCGCGGGCCGCCTGGCCGCGCTGCGCGAGCAGGTGGACGCGCGCCTGCGCGCCCAGCCCGCCGACCCCCTGGCCCAGCGCCTGCGCGCCGAAACCGAGGTGGCCGAGGGCCAGCTCGGCGCCGCGCAGCAGCGCCTGCTGCAGGTCTGGCTCACGGCGGGCGACGCTGCGGCCGCCGCGCGCCGCGCCGCGTTGCTGCTGGCGCTGGAGCAGGGCGATGCGGCGCGCGCCTTCATCGCCCAGGCGCGCGCCCAGGCGCCCCACGCCGTGGCGCTGCTGCTGGCCGACGCCGACGCCCGCCGCCTCGATGGCGATGCCGGTGGCGCCCTGGCCCTGTACCGCCAGGCCGCCGCGCAGGCGCGCGGCACCCCGGAGGAAGGCGCCGCCCTGGCCGGCCTGGGCCGCGCGCTGCGCGAGCGCGGCGACCTGGCCGCCGCGCGCGCCGCCCTGGCCCAGGCCGTGCAGCGCCAGCCGCACGACGCCGACACCCTGGCCCAGGCCGCCACCGCCGATGCGCAGGCGCTGCGCTTCGGCGCTGCTGCAGAGGGCTTCGGCCAGGCGCTGGCGCAGGCGGGCGACGACTACGTGGCCCTGGCGGGCGCGGGCCTGCTGGCGCTGCAGCGCGGCCAGAGCGCCGCCGCGCGCGAACTGCTGCTCAAGGCCCTGGTGATCGAGCCGCGCTACGCCCAGGCCCAGGTGTGGCTGGCCGTGGCCGAATACCGGCTGGGCCAGGCGGGCGCGGCCTTCGACGCCCTGGAGCGCGCGCGCCAGGCCGACCCGCGCGACCCGCTGCCCTGGCAGATCGCCTCGGTGCTGCACAACGACGCGGGCGAGCCCGAGCAGGCCGTGGCCGCCGCGCGCGAGGCCCTGGCGCGCCTGCCCTACCTGAAATCGCTCAACCCGCTGGCGAGCGACAGCCAGGGCTCGGCCAGCCTGGGCAAGGCGCTGGCCGACTTCGGCCTGGAACACTGGGCGCGTGCCTACGTGCAGCAGTCCTACTACCCGCTGTGGGCGGGCAGCCATTTCTTCCTGGCCAACCGCTACGAGAGCGAATACGCCCGCATGTCGGAGCTGTACCAGGGCTACCTGAGCGACCCCACGGTGTTCGGCGCGAGCGAAAAGCACCCCGGCGTGTTCCTCACCGCGCTGCACGAGGCCAGCCTGGGCCTGAGCGGCACGCGCGAGGCCTTGCGCAACACCGCCAGCGCCGACGCGGGCCTGCGCGGCTTCAGCGCCGCGCCGCTGCCGCTGGCCTGGCTGTTGCGCACCGATGGGGTGGTGATGCAGCCGCGCGACGGCCCGCCCGGCAGCCTGTACCGCATGCACGCGCCGCAGATGCAACTGGCCCTGGGCGCGCGCCCCACGGACCGCCTGGGCCTGTTCGCCATGTTCACCGAGGGGCGCATGCGCTACCGCTTTCCCTGGGGGCTGGACTTCGGCAACGGCATCACCTTCAGCGACACCGCGCGCTATGCGACGCGGCGCGGCGATTTCGGCGGCTCCTGGCGCTGGTCGGCCGACGCGCAGACCTGGTTCAAGCTGCACCGCGTCAGCGACGACACCGGCCTGTCGCTCGACGACGCGCAGTGGGGCCCGCAGGCCTACACCTACCGCAGCCAGGAATATGGCCTGTACCTGCGCCACACAGCGCAGACCGGGGCGCTGCGCTGGAGCCTGGGCTGGGAGAGCGTGCGCCGCAGCGCCGGCAGCGACATCCGCGACGACCTCGTGGCCTCGCCGCGCACCAACCTGGAGCGCTACGACATGCCCTGGGCCGCGCTGGAATGGGCGCACGGCCCGTGGCGCCTGCACGCCGCCGCCACCTGGCCGCGCCTGCGCTTCCAGGAAGACAACGCCTACCGCGACAGCCTGACCGGCGAGGACCTGCTCGAACCTGCAAGCCAGGGCACGCGCCTGGCGCGCCAGCTGCGCCCGCGCCTGGGCGCGAGCTACCGCTGGGGCCCGGGGCGCGCGCTGCACTGGGCCTGGCAGGAGAGCCTGCACGCCCCCGGCACGCACACCCTGGCCCCCGTGGCCACCGGGGCCATCCCCATCGACTACCAGTACCAGCTGCCCGGCAGCCTGGCGCGCAAGCACGCGGTGCAGCTGGACTGGGAGCTGGGGCCGCGCAGCTTCGCGACGGCCAGCCTGGCGCAGCAGGAAATCCGCAACCCGCGCATGGCCGACGGGCGGCTGTACGGCCAGGCCATGGGCGCGCTGTTCGACTACGTGGGCACGCTGGCGCCCGCGCAGATGTCGGCGCAGACGCAGATCGACCCCTACCAGGGCACGCCGCGCTTCGGCCACGGGCGGCTGCGCCAGGCGGGCGTGGCGCTCAACCAGGTGCTGGCGCCGCGCTGGAGCCTGCTGGCCAGCTACGCCTGGGCCGACGCGCGCAACCTGGGCGCGGGCTACGAGGGGCTGCGCCTGCCCGGCGTGCCGCGCCATACCGCCGTGCTGGGCAGCACCTGGCGGCACACGGGGCGCGGCTACACGGTGCTGGGCATGGTGTACCGCGGCGGGCGCTTTGCCGACGAGGCCAACACGCAGGCACAGGCACCGGGCTGGACGGTATCGCTGGCCCACGCCCTGGAATCGCCCAGCCGCGAGTGGGCGCTGTACCTGTCGGCGCAGCAGGCGCTGCAGCCCGGTGAAAAGCCTGTGCTGTGGGCGTTGCTGCGCTGGAGGCCGTGA
PROTEIN sequence
Length: 1130
MRQHLLGFAPWLLTLSNAFAQGSGCQAPPGADGSAAEIVALSGQGQARADGAAPWAAAALAQRLPPGAEVRTLALSSAALLLADRTQIRLAAQAQVRLCDARPAQTRLELAVGRLWARAKGQGVNVELRTPAVLAAVRGTDWDVEVDAQGRTTLTVLSGRIDVSNAQGAVVLGPSEQAVAEPGQAPVKRLLVRPRERVQWVMAPALTPPGWPELADATAPGAAWRAPALQALRAGRLAALREQVDARLRAQPADPLAQRLRAETEVAEGQLGAAQQRLLQVWLTAGDAAAAARRAALLLALEQGDAARAFIAQARAQAPHAVALLLADADARRLDGDAGGALALYRQAAAQARGTPEEGAALAGLGRALRERGDLAAARAALAQAVQRQPHDADTLAQAATADAQALRFGAAAEGFGQALAQAGDDYVALAGAGLLALQRGQSAAARELLLKALVIEPRYAQAQVWLAVAEYRLGQAGAAFDALERARQADPRDPLPWQIASVLHNDAGEPEQAVAAAREALARLPYLKSLNPLASDSQGSASLGKALADFGLEHWARAYVQQSYYPLWAGSHFFLANRYESEYARMSELYQGYLSDPTVFGASEKHPGVFLTALHEASLGLSGTREALRNTASADAGLRGFSAAPLPLAWLLRTDGVVMQPRDGPPGSLYRMHAPQMQLALGARPTDRLGLFAMFTEGRMRYRFPWGLDFGNGITFSDTARYATRRGDFGGSWRWSADAQTWFKLHRVSDDTGLSLDDAQWGPQAYTYRSQEYGLYLRHTAQTGALRWSLGWESVRRSAGSDIRDDLVASPRTNLERYDMPWAALEWAHGPWRLHAAATWPRLRFQEDNAYRDSLTGEDLLEPASQGTRLARQLRPRLGASYRWGPGRALHWAWQESLHAPGTHTLAPVATGAIPIDYQYQLPGSLARKHAVQLDWELGPRSFATASLAQQEIRNPRMADGRLYGQAMGALFDYVGTLAPAQMSAQTQIDPYQGTPRFGHGRLRQAGVALNQVLAPRWSLLASYAWADARNLGAGYEGLRLPGVPRHTAVLGSTWRHTGRGYTVLGMVYRGGRFADEANTQAQAPGWTVSLAHALESPSREWALYLSAQQALQPGEKPVLWALLRWRP*