ggKbase home page

scn_reactorb_scaffold_19608_6

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(3946..4830)

Top 3 Functional Annotations

Value Algorithm Source
Repb plasmid partition n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 294.0
  • Bit_score: 511
  • Evalue 5.00e-142
Repb plasmid partition {ECO:0000313|EMBL:EIK88990.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 294.0
  • Bit_score: 511
  • Evalue 7.00e-142
plasmid stablization protein ParB similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 292.0
  • Bit_score: 479
  • Evalue 5.90e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAGCCAGCCACCACTGGGTTTCATCCCGGAGCCGATCACGCTGGCACTGGATCGGATTCTGCCGTCGCGCAAGCCGCCGGAGGGCCTGCATGCCTCGCGCAAATTCAAGCAGATCGTCACTTCGATGGAGGCCATTGGGCTGATCGAACCGCTGAGCGTCAGCAAAGCCGACAAGAAAACGGGCCAGCACATTCTGCTTGACGGACACATGCGCCTATTGGCACTGCGGCAACTCGGTTACACCGACGCGCCCTGCCTGATCGCCACGGACGACGAGAGCTACACCTACAACAACCGGATCAACCGCATCGCGACCATCCAGGAGCACCAGATGTTGCGGCGCGCGGTCGAGCGTGGCGTGTCGGTGGAGCGATTGGCCAAGGCGCTGAATGTGGACACCAGCTTGATCCACAAGAAGGTGAGCTTGCTCGACGGCATCTGCCCGGAAGCGGTTGAGATGCTGAAGGATCAGCACTTCCCCGCTGGCCTCGGATCGGTGCTGCGCCGAATGAAGCCGGCACGACAGGTCGAGTGTGTGGAACTGATGCTCACGGCCAACAACATGACCATCGCCTATGCCGAAGCCTTGTTCGCGGCGACGCCGGCGCACTTGGTGGCGGGGGAGAAGCGCGCCCGGAAGCTGCCGGGTGTCACGGCAGAACAGATGGTCAAGATGGAGCGCGAAATGGGCAACCTGCAAGGACAACTGAAGGTGGTCGAGAAGTCCTACGGGCAGGACGTTCTGCTGCTCGTGCTGGCGCGCGGCTACCTTGGCAAGCTGGTCGACAACAAGGCGGTCTATCGATTCCTGAAACAGCGCCAGCCCGACGTGCTCGCCGAGTTCGAGAACATCGTCCAGACCGTGGCGCTGGACGGAAAGTGA
PROTEIN sequence
Length: 295
MSQPPLGFIPEPITLALDRILPSRKPPEGLHASRKFKQIVTSMEAIGLIEPLSVSKADKKTGQHILLDGHMRLLALRQLGYTDAPCLIATDDESYTYNNRINRIATIQEHQMLRRAVERGVSVERLAKALNVDTSLIHKKVSLLDGICPEAVEMLKDQHFPAGLGSVLRRMKPARQVECVELMLTANNMTIAYAEALFAATPAHLVAGEKRARKLPGVTAEQMVKMEREMGNLQGQLKVVEKSYGQDVLLLVLARGYLGKLVDNKAVYRFLKQRQPDVLAEFENIVQTVALDGK*