ggKbase home page

scn_reactorb_scaffold_6725_30

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 32914..33213

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor, beta subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TXE0_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 3.40e-42
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 9.50e-43
Integration host factor beta-subunit {ECO:0000313|EMBL:GAO23755.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 4.70e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGACCCGATCCGACCTCGTTGAAGAACTGGCCGCCCGCTTTGGCCAGCTCACGCACCGCGACGCCGAACACGCCGTCAAGACCATCCTCGACGCCGTGGGCGATGCGCTGGTGCGCGGGCACCGCATCGAGATCCGGGGATTCGGCAGCTTCTCTGTCACGCACCGCCCTCCCCGCCTGGGCCGCAACCCGCGCAGCGGCGAAGCCGTGCAGATTCCCGAAAAGCGCGTGCCCCACTTCAAGCCTGGAAAGGCGCTGCGCGAATCGGTGGCGCAGCAAAGCGCCGAAACAGGCGCATAA
PROTEIN sequence
Length: 100
MTRSDLVEELAARFGQLTHRDAEHAVKTILDAVGDALVRGHRIEIRGFGSFSVTHRPPRLGRNPRSGEAVQIPEKRVPHFKPGKALRESVAQQSAETGA*