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scn_reactorb_scaffold_6725_32

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 33544..34701

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat protein n=3 Tax=Acidovorax avenae RepID=F0Q8V0_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 385.0
  • Bit_score: 591
  • Evalue 3.80e-166
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 385.0
  • Bit_score: 591
  • Evalue 1.10e-166
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 385.0
  • Bit_score: 591
  • Evalue 5.30e-166

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGGAATTTGACCTGAGCTGGATCCTGCTGGGGCTGCCCCTGGCCTTCGTGCTCGGCTGGTGGGCCTCGCGCTTCGACCTGCGCCAGCTGCGCCTGGAAAACCGCCAGGCGCCCAAGGCCTATTTCAAGGGCCTGAACTTCCTGCTGAACGAGCAGCAGGACCAGGCCATCGACGCCTTCATCGAAGCCGTGCAGAACGACCCCGACACGTCGGAGCTGCACTTCGCCCTGGGCAACCTGTTCCGCAGGCGCGGGGAATACAACCGTGCCGTGCGCGTGCACGAACACCTGCTCTCGCGCGGCGACCTGAGCAGCGCCGACCGCGACCGCGCCCAGCACGCCCTGGCCCTGGACTTCCTCAAGGCCGGCCTGCTCGACCGCGCCGAGGACGCCCTCAAGCCACTCGAAGGCACGGCCTACGAGCATGAGGCACGGCTGGCACGGCTGGCGATCTACGAGCGCACGCGCGATTGGCCCCAGGCGGCCGCCATCGCCGCCAAGATCCAGGCGGCGGGCCAGGGCGACTTCAGCCAGCGGCAGGCGCATTACCTGTGCGAACAGGCCCAGGCCGCCGCAGCCCAGGGTGACGAGGCCAAGGCCGGGCGGCTGCTCGACGAAGCCCATGCCGTCGCGCCGCAAGCGCCCCGGCCGCTGATCGAGCGCGCGCGCCAGCAGCAGCGCCAAGGCCACGGCAGCGCGGCCGTCGACACCCTCGTGCGCCTGGCCGGACAGGCCCCGGCGGCACTGCCCCTGGCCGCCTCGCTGCTTCTGGAAGCAGCCGCCGCCAGCGGGCGCAACGACGAAGCGCGGGCCCTGCTGGAAGGCCACTACGAACGCGCCCCGTCACTCGATCTGCTCGAAGCCCTGGTGGCCCTGGACCGCGCCAGCGGCGATGCCCAGTGCCCCGGCCGCACACGCTATGCCCTGCACCTGGCACATGAACCCTCCCTGGTGGCCACGACGCAGTGGCTGGCGGACGAGCGCCTGGAGCACGAGGACTTTCATCCCGCCATCCAGCGGGCGCTCGACCAGGCCGCCAAGCCGCTCATGCGCTACCGCTGCGCGGCCTGCGGCTTCGAGGCGCGCCAGCATTTCTGGCAATGCCCCGGCTGCCAGAGCTGGGACAGCTACCCTGCCCGCCGCGTCGAAGAACTTTAG
PROTEIN sequence
Length: 386
MEFDLSWILLGLPLAFVLGWWASRFDLRQLRLENRQAPKAYFKGLNFLLNEQQDQAIDAFIEAVQNDPDTSELHFALGNLFRRRGEYNRAVRVHEHLLSRGDLSSADRDRAQHALALDFLKAGLLDRAEDALKPLEGTAYEHEARLARLAIYERTRDWPQAAAIAAKIQAAGQGDFSQRQAHYLCEQAQAAAAQGDEAKAGRLLDEAHAVAPQAPRPLIERARQQQRQGHGSAAVDTLVRLAGQAPAALPLAASLLLEAAAASGRNDEARALLEGHYERAPSLDLLEALVALDRASGDAQCPGRTRYALHLAHEPSLVATTQWLADERLEHEDFHPAIQRALDQAAKPLMRYRCAACGFEARQHFWQCPGCQSWDSYPARRVEEL*