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scn_reactorb_scaffold_8582_98

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(88110..90041)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8NGB2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 643.0
  • Bit_score: 1174
  • Evalue 0.0
Type VI secretion protein {ECO:0000313|EMBL:KHK65583.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 643.0
  • Bit_score: 1174
  • Evalue 0.0
Type IV secretory pathway, VirD2 component similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 643.0
  • Bit_score: 1171
  • Evalue 0.0

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Taxonomy

Pseudomonas frederiksbergensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1932
GGCCAGGGCCAGAGCCAGAGCTTCGTTTCCAAGGTGCTCAAGCAGGCCGGCAAAGCCAGCGGAGGCAAGTCCTCGATGCGCCCCACAACCGGCGGCACCGGCGCACGCGCCGGCCAGCGCCCCGGCTCGCGCCTGGGGCGCGGCCATACGGCGGCGCGCTTCGCCGGGGCGAAGCTCACGCCCATGTCGCGGCACGTGACCATCAAGACGCTACTGGTCAACCAGCGCAATGCCAGCCCGCAGTCGCTTGCCAAGCACCTGCGCTACATCGAGCGCGACGGCGCGGGCAGGGCTGGCGCACCGGGCCAGGCCTACGGGCCGCAGACCGATGAAGCCGACCTCGACGCCTTCAAGGAGCGGGCCGCCGCCGACCGCCACCATTTCCGTTTCATCGTCTCCCCGGAGGACGGGGCCGAACTGGACGACCTGCGCACCTACACCCGCCATCTGATGAACCGCATGGAGGCCGACCTGGGGACGCGGCTGGATTGGGTGGCGGTGGATCACTGGAACACCGACAACCCCCATACCCACCTGATCGTGCGCGGGCGTATCGACACCGACAAAGACCTCATCATCGCGGGCGACTACATCGCCCACGGCTTTCGCCATCGGGCCGCAGAGCTGGCGACGGAATGGCTGGGGCCGCGCACCGAACTGGAGATCCAGCAGACCTTGCAGCGCGAAGTGGAGCAAGAGCGGTGGACGAGCCTCGACCGGACGCTGCAACGCGAGGCCGACGAGGATGGCCGGGTGCAGATCGAACGCTTCAACGAACCTCGGCTGCAACGCCAGCGTCTGCTGCTGATCGGCCGCCTGCAACGCTTGCAGCGCCTGGGCTTGGCCGACGAGGTGCAGCCCGGCACCTGGGCCGTCCATGCCGATGCGGAAAAGACCCTCCGCGTCCTGGGCGAGCGCGGCGACATCATCCGCACCATGCAACGGGCCATGCGCGGCGAGCCGCGCGAGCTGGCGGTGTTCGAGCCGGGCGACGATGGCCGAACCATTCTCGGGCGCGTGGCCGCGAAGGGGCTGGCCGACGAGCTGCGCGACCGGGGCTATCTGGTCATCGACGGCGTGGACGGCAAGGCGCACTACGTCGCGCTGAACGCCCGCGACGAGCTGACGAACTATCCGGCCGGGGCCGTGGTGGAGGTGAAGGGATCGGCCGACGTGCGCGCGGCCGACAGGAACATCGCCGCGCTGGCGAGCGATGGCCTGTACCGCACCGACCACCACCTCGCCTTCGCGCAGGGCCAGGCCGTCCCCGGACGCGACCCGCAGGAGGTCGTCGCCGCCCACGTCCGCAGGCTGGAAGCCCTGCGCCGTGCCGGCATCGTGGAGCGCGCGACCGAAGGGCTATGGAAGGTGCCGGGCGACCTGCCCGAACAGGGCCGCCGCTACGACGCGCAGCGCCTGGGCGGCGTGGCCGTGGAGCTGAAATCGCACCTGCCCATCGAGCGGCAGGCCCGCGTGATCGGGGCCACTTGGCTCGACCAACAGTTGATCGGCGGCGGCACCGGCCTGGGCGACCTGGGCTTTGGCGCAGAGGCCAAGCAGGCGATGCAGCAGCGCGCTGACTTCCTGGCCGAACAGGGGCTGGCCGAGCGGCGCGGCCAGCGCGTGATCCTGGCGCGCAACCTGCTAGGCACGCTGCGCAACCGGGAGCTGGCGCAGGCCGCGAAGGACATTGCCGGCGAAACGAGCCTGGAGCATCGCCCGGTGGTCGACGGGCAGCGCGTGGCGGGCATCTACCGGCGCAGCGTCATGCTCGCCAGCGGGCGCTACGCAATGCTCGATGACGGCATGGAATTCAGCCTAGTGCCGTGGCGGCCAGTAATCGAACAGCGGCTGGGGCAGCAGCTCGCCGCGACGGTGCGCGGCGGGGGGGTGTCCTGGGATTTTGGCAAGCAACGTGGTCGAAGTATCTAG
PROTEIN sequence
Length: 644
GQGQSQSFVSKVLKQAGKASGGKSSMRPTTGGTGARAGQRPGSRLGRGHTAARFAGAKLTPMSRHVTIKTLLVNQRNASPQSLAKHLRYIERDGAGRAGAPGQAYGPQTDEADLDAFKERAAADRHHFRFIVSPEDGAELDDLRTYTRHLMNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRIDTDKDLIIAGDYIAHGFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREADEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADEVQPGTWAVHADAEKTLRVLGERGDIIRTMQRAMRGEPRELAVFEPGDDGRTILGRVAAKGLADELRDRGYLVIDGVDGKAHYVALNARDELTNYPAGAVVEVKGSADVRAADRNIAALASDGLYRTDHHLAFAQGQAVPGRDPQEVVAAHVRRLEALRRAGIVERATEGLWKVPGDLPEQGRRYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGTGLGDLGFGAEAKQAMQQRADFLAEQGLAERRGQRVILARNLLGTLRNRELAQAAKDIAGETSLEHRPVVDGQRVAGIYRRSVMLASGRYAMLDDGMEFSLVPWRPVIEQRLGQQLAATVRGGGVSWDFGKQRGRSI*