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scn_reactorb_scaffold_43168_150

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 177728..178468

Top 3 Functional Annotations

Value Algorithm Source
LasR protein n=1 Tax=Pseudomonas aeruginosa RepID=A9JPX1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 242.0
  • Bit_score: 103
  • Evalue 2.00e-19
Transcriptional regulator {ECO:0000313|EMBL:BAQ40949.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 242.0
  • Bit_score: 106
  • Evalue 4.30e-20
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 232.0
  • Bit_score: 88
  • Evalue 1.90e-15

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCTTTTAACCCGCTCTATCTCGTCGAAGAAGTGGCCACGGCCCGCAATGCTGCCGAACTGCGCACCGCCATCCAGCGCGCCGCGTCGCGGCTGGGGTTCGACACCTACTGCTTCGGCATGTTCTACAACGAGCCGGGTAGCGGCGAGCCCCAGTATTTTTCTATTGACAACTACCGGCCTGGCTGGGCCGAGCACTACACCCGGTCTGGCTACCAGGAGTTGGACGTGGCCGTCACCCACTGCGCAGGCCACACCACCCCGCTGGTGTGGACGCGCAAGCTCTACGACACCCCTCAGCTCAAACATCTGGAAGAAGAAGGTCTGGCGCAGGGAATAGATGGCGGCGTCACGCTGCCCGTTCACAGCCCTTGGCTCATCGGCATGGGCGGGCTCCTCCTGGCCAGCGCTGAGCACGCCGACCGCGTGGCGGCGAGGGCCGCTGACTTCGTGGCGACCGGCCAACTGCTCGCCTGCCACGTGGCCCAGGCCGTGCGCAACCTCGATCTGCTGCCCGCCTCCATGGCCTTTCGCCCCACCGAGGAACTGACACCGCGCGAGGCCGAGTGCCTGCAATGGGCGGCATCCGGCCTGCCCGCCCAGGCCATCGCCCAGCGCATGGGCATCTCGGTGGCCACCGTCAACAGCTTCTTCCTGCCCGCCATCCGCCGCAAGCTGGGCGTGGCCAGCACGCTCGAAGCCGTCAGCCTGGCGTTTCGCCACCGGCTGATCAGGCTGTAA
PROTEIN sequence
Length: 247
MAFNPLYLVEEVATARNAAELRTAIQRAASRLGFDTYCFGMFYNEPGSGEPQYFSIDNYRPGWAEHYTRSGYQELDVAVTHCAGHTTPLVWTRKLYDTPQLKHLEEEGLAQGIDGGVTLPVHSPWLIGMGGLLLASAEHADRVAARAADFVATGQLLACHVAQAVRNLDLLPASMAFRPTEELTPREAECLQWAASGLPAQAIAQRMGISVATVNSFFLPAIRRKLGVASTLEAVSLAFRHRLIRL*