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scn_reactorb_scaffold_39970_70

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(76121..76690)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X446_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 183
  • Evalue 2.00e-43
RNA polymerase sigma factor {ECO:0000313|EMBL:KHA75822.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 153.0
  • Bit_score: 195
  • Evalue 5.50e-47
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 184
  • Evalue 2.50e-44

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAGAAAAGTTCTCACTACCAATCCCGTGCCTACCCTCCCGCTCCTTCATCCCGCCGCGCCGCCGTCCGCCCCCCGGCCCATGGCGATGGCGGCCCAGCTCTTCAGCGAGCACCAGCCGTGGCTGCTGCAGCGGCTGTCGTACCGGCTGCGCAACCGGGCCGATGCGGAAGACCTGGCCTCGGAGACCTTCCTGCGCGTCATCACCCGGCCGCAGGCCGATGCCCTGGAAGCGCCACGGGCCTACCTTGCCACCGTGGCCAAGCGCCTGCTCATCAACCTCTGGCACCGCCGGGAACTGGAGCAGGCCTATCTCGACGCGATCGCCGCACTGCCGCAGGCCGTCTCGCCGTCGCCCGAGGAAAGGGCCCTGCTGGTCGAGTCCCTGGAGGCCATCGCGCATGCACTGGATGCGCAACCCGACAAGGCGCGCCAGGCCTTCCTGATGAGCCAGCTCGACGGCCTCACCTACGCCCAGATCGCACAGCAGCTGGGGGTTTCGGCCAGCATGGTGCGCCGCTACATGGCCCGGTGCTGGGAAGCCTGCTGGCATCTGCGCACCGGCCCATGA
PROTEIN sequence
Length: 190
MRKVLTTNPVPTLPLLHPAAPPSAPRPMAMAAQLFSEHQPWLLQRLSYRLRNRADAEDLASETFLRVITRPQADALEAPRAYLATVAKRLLINLWHRRELEQAYLDAIAALPQAVSPSPEERALLVESLEAIAHALDAQPDKARQAFLMSQLDGLTYAQIAQQLGVSASMVRRYMARCWEACWHLRTGP*