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scn_reactorb_scaffold_39970_99

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(106903..107364)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3Z2_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 140.0
  • Bit_score: 233
  • Evalue 8.00e-59
RNA-binding S4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 140.0
  • Bit_score: 233
  • Evalue 2.30e-59
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADX46701.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 140.0
  • Bit_score: 233
  • Evalue 1.10e-58

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGTAGCGCCCGGCTCGGGCCAAGGCACAATCGCGCCCATGACGCCCCCGGAATCGATGCGCCTGGACAAGTGGCTCTGGTGCGCCCGCTTTTACAAGACCCGCAGCCTGGCCGTGGAAGAGATCGGCAAGGGCCGCGTCACCGTCAATGGCGCCAACGCCAAGGCCGCGCGCGAGCTGCGCGTGGGCGATACGGTGGCGCTGCGCCAGGGCCCCATCGCCCGCACGGTGGTGGTGCAGGCGCTCAGCGCCATGCGCGGCCCCGCCCCCGTGGCCCAGCAGCTTTACGCCGAGACCCCGGAGAGCCTGGCTGCACGCGCGCAAGCAGCGGAACAGCGCCGCCTGGCACCCGAGCCCGCCGCCAGCCTGCACGACGGCCGCCCCACCAAGCGCGACCGGCGTGACATCGAGCGCGTGCAGCGCGACTGGGGCAGCCGCTGGAGCGCTTCGATCGACGATTGA
PROTEIN sequence
Length: 154
MVAPGSGQGTIAPMTPPESMRLDKWLWCARFYKTRSLAVEEIGKGRVTVNGANAKAARELRVGDTVALRQGPIARTVVVQALSAMRGPAPVAQQLYAETPESLAARAQAAEQRRLAPEPAASLHDGRPTKRDRRDIERVQRDWGSRWSASIDD*