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scn_reactorb_scaffold_126016_2

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 350..1225

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic subunit n=2 Tax=Bordetella holmesii RepID=M5NJC3_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 449
  • Evalue 2.30e-123
integrase core domain protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 449
  • Evalue 6.50e-124
Integrase core domain protein {ECO:0000313|EMBL:AHV93554.1}; TaxID=1247649 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii ATCC 51541.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 449
  • Evalue 3.20e-123

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGAAGTACGCCTTTGTCCGGGATCATGCAGCCATCTTCCCGGTGCGGCGTATGTGTGCTGTGCTTGATGTTCATCCCAGCGGCTACTACGCCTGGCGTCGCTCTCCACACAGCGCCCGAACCCTGGAGGATCGGCGGCTGATGGAGCTCATTCGTCAGAGCTGGCAGGACAGCGATCGCCTCTACGGCTATCGCAAGGTCACTCACGATCTGCGGGATCTTGGTGAGCGCTGTGGCAGGCATCGAGTGGCGCGGCTCATGCGCGAGAATCGCCTGCGCTCGCAGACCGGATACAAACGACGCCCAGGCAATCGGTATGGACGTCCCAGCTTGGTGGCTGACAATCTCCTGCAGCAGCAGTTTGATGTGGCGGCGCCGGATCAGGCGTGGGTCACCGACATCACCTACATCCGCACGCACGAGGGATGGCTGTATCTGGCCGTGGTGCTGGATCTCTTCGCCCGCACCGTGGTGGGTTGGTCCATGAGCAGTCGCATCGACAGCGATCTGGTGCTCAACGCCTTGCTTGCCGCCGTCTGGCGCAGGCGCCCCAAGAATGAGGTCATCATCCACAGCGACCAGGGCAGTCAGTTCGGCAGCCACGACTGGCGTGACTTCCTGAAGACCCACAAACTCAAGCCCAGCATGAGTCGGCGCGGTAACTGCCACGACAACGCCGTGGCCGAGAGCTTCTTCCAGTTGCTCAAACGAGAGCGAATCCGGCGCCGCGTCTATACCACCCGGGAGCAAGCCAGGGCCGATATCTTCGATTACATCGAGATGTTCTACAACCCGAAGAGGCGACACGGCCACGCAGGAGAGGTGTCCCCGGTAGAATTTGAGAGACGCCATTTTTTGAAAACCGGGACTGTCTAG
PROTEIN sequence
Length: 292
VKYAFVRDHAAIFPVRRMCAVLDVHPSGYYAWRRSPHSARTLEDRRLMELIRQSWQDSDRLYGYRKVTHDLRDLGERCGRHRVARLMRENRLRSQTGYKRRPGNRYGRPSLVADNLLQQQFDVAAPDQAWVTDITYIRTHEGWLYLAVVLDLFARTVVGWSMSSRIDSDLVLNALLAAVWRRRPKNEVIIHSDQGSQFGSHDWRDFLKTHKLKPSMSRRGNCHDNAVAESFFQLLKRERIRRRVYTTREQARADIFDYIEMFYNPKRRHGHAGEVSPVEFERRHFLKTGTV*