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SCN18_14_9_16_R1_B_scaffold_5498_4

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(2251..4005)

Top 3 Functional Annotations

Value Algorithm Source
peptide transporter n=1 Tax=Rhizobium giardinii RepID=UPI00036EBDEE similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 585.0
  • Bit_score: 1039
  • Evalue 0.0
Plasmid partitioning protein {ECO:0000313|EMBL:EHH03530.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 585.0
  • Bit_score: 1034
  • Evalue 0.0
peptide transporter similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 585.0
  • Bit_score: 1023
  • Evalue 1.30e-296

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
ATGCAGATCATGAAGGTTGACCCACGCGCTCTGAAGGAAAACCCCGACCGGATGCGCCAGTCGAAGTCGTCGCCGCAGGCGGACGCGTTGATGCTGGCGACAATCAAAGCCGTCGGTATCGTTCAGCCACCTGTTGTCGCACCGGAAACGGATGGCGGAAACGGTTATATCATCGACGCCGGCCACCGCCGCGTCCGGCTCGCCATTGCTGCCGGTCTCGAAGAAATCGAGATCCTCGTCGCAGACGCTGCCAACGACAATGGCGCAATGCGCTCGATGGTCGAGAACAGCGTCCGGGAAGCCCTCAACCCGGTCGACCAGTGGCGCGGCATCGAACGGCTCGTGGCCCTCGGCTGGACCGAGGAAGCGATCGCCGTGGCTCTCGCCCTTCCCGTCCGCCAGATCCGCAAGCTACGCCTGCTCGCCAACGTCCTGCCGGCCATGCTCGAACAGATGGCGTTGGGCGATATGCCGTCCGAGCAGCAGTTGCGCGTCATCGCGGCTGCCGGACAGCTCGACCAGAAGGAGGTCTGGAAAGCCCACAAACCTAAAAAGGGTGACACCGCGCCCTGGTGGCAGGTTGCCAATGCGCTGACCAAGAAGCGTATGTATGCCAAGGATGCGAGCTTTGGCGATGATCTGGCTCAAGCCTACGGCATTGAATGGGTCGAGGATCTCTTCGCGCCGGCCGACCAGGATGGCCGCTACACCACGAATGTCGAAGGGTTCCTCGGTGCCCAGCACGAGTGGATGACAAATAATCTGCCGAAGAAGGGCGGGATCGTCGAGGTCAACAGCTGGGGCCAACCTGAACTGCCGAAGAAGGCTTCTCAGATCTACGGCAAGCCGTCCAAGTCCGACCACGCGGCGATGTATCTCGATCGTGATGGCAAGGTGCAGACGGTTCATTACCGGATGCCGGAGGCCGCGAAGCCCAAGGGGATTGCTGGCGACGGACCGGCTACTGGCGGCGATGACACGGATGCAACCACCACGCCGAAGGTTCGGCCCGATGTGACCCAGAAGGGCCATGACATGATCGGCGATTTCCGCACCGATGCCCTGCACGATGCGCTCGGCCGCGCGCCGATCGAGGACGACATGCTGATGGCGCTGATGGTGCTGGCCTTCGCCGGGCAGAATGTCCGCATCGACTCCGGCGCGGATGGGACTTTTTACGGCGGCAAGCGCTTCTCGCGCCATGCGGTCGGACTGTTTGACGAGCATGGCAAGCTCGCCTTCGATCAAGACACCCTGAGGGTCGCGGTTCGCTCCGTGCTGATCGACGTTCTCTCTTGCCGCCGCGGCATGTCGAACAGCGGCATGATCGCGCGCATCGCCGGCGACGCGATCGGCGCTGACGAATTCCTGCCAAACATGGGTTCGGAAGACTTCCTCTTATGCCTGTCGCGCCAGGCGCTGGAAGCATCTTGCGCCGAAGCATCGGTCCAGCCGCGGCAGAAGGTTCGGGAAACCCGCGCCGCACTGGTCGAGCATTTTGCCAACGAGCATTTTGTTCACCCATCGGGCCGCTTCGCGCCGCCGGCCGATGAGCTGCTTGAATGGATAAGGGCGGGTGCCGCCACCAACGTCATCGGCGCTCGCTCACGCAACGAGGAGGATGATGCCGACTGCGTAAATGAGGAGCATGCAGGGCAGGTCGACGAGGATGTCGGCCATGACGATCCGGAGCATGCTGGCGTCGCACCCGAGGAAGAATACGACCAGGACTTCGACCAGAGGGCAGCAGCATGA
PROTEIN sequence
Length: 585
MQIMKVDPRALKENPDRMRQSKSSPQADALMLATIKAVGIVQPPVVAPETDGGNGYIIDAGHRRVRLAIAAGLEEIEILVADAANDNGAMRSMVENSVREALNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLEQMALGDMPSEQQLRVIAAAGQLDQKEVWKAHKPKKGDTAPWWQVANALTKKRMYAKDASFGDDLAQAYGIEWVEDLFAPADQDGRYTTNVEGFLGAQHEWMTNNLPKKGGIVEVNSWGQPELPKKASQIYGKPSKSDHAAMYLDRDGKVQTVHYRMPEAAKPKGIAGDGPATGGDDTDATTTPKVRPDVTQKGHDMIGDFRTDALHDALGRAPIEDDMLMALMVLAFAGQNVRIDSGADGTFYGGKRFSRHAVGLFDEHGKLAFDQDTLRVAVRSVLIDVLSCRRGMSNSGMIARIAGDAIGADEFLPNMGSEDFLLCLSRQALEASCAEASVQPRQKVRETRAALVEHFANEHFVHPSGRFAPPADELLEWIRAGAATNVIGARSRNEEDDADCVNEEHAGQVDEDVGHDDPEHAGVAPEEEYDQDFDQRAAA*