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SCN18_14_9_16_R1_B_scaffold_6960_1

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(1..4086)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
lactate dehydrogenase n=1 Tax=Rhizobium giardinii RepID=UPI00037158BA similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 1363.0
  • Bit_score: 2523
  • Evalue 0.0
Putative methylase {ECO:0000313|EMBL:CDN95737.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 1363.0
  • Bit_score: 2520
  • Evalue 0.0
methylase similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 1363.0
  • Bit_score: 2463
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4086
GTCGATTTCCGGCAGGGTTGGGACGATCTCGGCTCCTCACTCGAAACTGCCGTATCCAAAGCGGAGTATTCGTCGCTCGCGCGTTGCACCCAGTATGCGCACTTCACGCCCGAGTTCATCATCCGTGCGATCTGGGCAGGGATCGCGAGGCTCGGCTGGCGCGGCGGCCGTGTCCTGGAACCGGGCATCGGCACGGGCCTGTTCCCGGCCCTGATGCCGGAGATTTATCGCGACGCCGCCTCTGTCACCGGCATCGAGCTTGATCCGGTCACGGCTCGCATCGTCGGTCTGCTGCAGCCAAAGGCCCGGATCATCAATGGCGACTTCGCGCGCACTGATCTGGCGCCGATCTACGATCTTGCCATCGGCAATCCGCCCTTCTCCGATCGTATCGTCCGCTCAGACCGTGCCTATCGGGCACTTGGCCTTCGCCTGCACGACTATTTCATTGCAAGGTCGATCGATCTCCTGAAGCCCGGCGCACTGGCCGCCTTCGCCACTTCACACGGCACGATGGACAAAGCAGATACAAAGGCGCGCGAGCATATCGCCAAATCGGCTGACCTGATCGCAGCAATCCGCATGCCAGAGGGGAGCTTTCGCCGCGACGCCGGTACGGATGTCGTAGTCGACATCCTGTTCTTTCGAAAGCGGAAGGCCGGCGAGCCCGAAGGCGATCAGATGTGGCTCGATGTCGACAAGGTCCGACCGGCCACCGACGATGAAGGTGCGATCCGCGTGAACAGGTGGTTCGCCCGGCACCCGGATTTCGTGCTCGGCACCCACGCGTTAACCTCCGGGCCGTTCGGTGAGACCTATACGTGCCGGCCACGCGGTGACGATCTTGAAACCGCCCTCGCCGCCGCCATCGAGCTTTTGCCGGCCTACATCTATGACGGCGAGCCTACGCCCATCGACATCGATCTGGAGGACGAGCTCGCAGAGATCGTTGATCTGCAGCCGAAGGGCGGACTTGTTCGCGAGGGCAGCTTTTTCCTCGACCGCTCTAAGGGTCTGATGCAGATGCTCGACGGAGCGGCCGCGCCGGTCATTGTCCGCAAGGGTCGCTCCGGCCATGGAATCTCGGAAAAGCACGTCCGGATCATCAGCAAACTCATCCCGATCCGCGATGCGGTGCGCGAGATCTTGAAAGCCCAGGAAACCGATCGCCCCTGGCGCGATCTTCAGGTCCGGCTGCGGATCGCCTGGTCGAGCTTCGTGCGTGATTTCGGGCCGGTCAACCACACCACCGTCTCGATCCATGAAGACGCGGAGACCGGCGAGGTCAAGGAGACCCACCGCCAGCCGAATCTCGCACCCTTCCGCGACGATCCGGATTGCTGGTTGGTGGCCTCCATCGAGGATTACGATCTGGAAACCGACACGGCAAAGACCGGTCCGATCTTCTCCGAACGCGTGATTGCGCCGCCGGCGGCCCCGACCATCGCATCGCCGGCAGATGCGCTCGCCGTTGTGCTGAACGAACGCGGCCATGTCGATATAGACCATATTGCCGAGCTGCTCCATAGCGATCCAGCTGATGTGATCGACGAGTTGGGCGGAGCCATCTTCCGCGACCCGGCAGATGGATCGTGGCAGACAGCCGACGGGTATCTTTCCGGCGCCGTTCGCACCAAGCTCGCGGCCGCGCAATCCGCGGCCGAACTCGATCCGACGTATGAGCGCAACGTTCGCGCCTTAACTGACGTCCAGCCGGCCGACCTTCGGCCCTCCGACATCACGGCTCGTCTCGGTGCGCCCTGGATCCCGGCTTCCGATGTGGTGGCCTTCGTCAAAGAAAAGATGCAAGCCGATATCCGGATCCACCATATGCCGGAACTCGGATCGTGGACGGTCGAGGCCCGCCAGCTCGGCTACACAGCGGCTGGCACATCCGAATGGGGAACGAGCCGCCGCCATGCTGGTGATCTCCTTGTCGACGCGCTGAACAGTCGGGTTCCGCAGATTTTCGACGTCTTCAAGGATGCCGATGGCGAGCGCCGGGTGCTCAATGTCGTTGATACGGAGGCGGCGCGCGACAAGCTGCAGAGGATCAAGCAGGCGTTTCAGGACTGGGTCTGGGCCGATCCCGATCGCACCGATCGGCTGGCCCGCGATTATAATGATCGTTTCAACAACATCGCTCCAAGGGCTTTCGATGGTTCTCACCTAAGACTTCCCGGCGCCTCTGGCGCCTTTACTTTATACGCACATCAGAAGCGCGGCATCTGGCGGATCATCGCCGATGGCGCGACCTATCTCGCCCATGCCGTTGGCGCCGGCAAGACGATGACCATGGCCGCCGCCATCATGGAACAGCGCCGGCTCGGCCTGATCGCCAAGGCGATGCTGGTCGTGCCCGGTCATTGCCTGGCGCAGGCTGCCCGCGAATTTCTGGCCCTCTATCCGAATGCCCGCATTCTCGTCGCCGACGAAACGAATTTCACCAAGGACAAGCGGGCGCGGTTCCTGTCGCGCGCTGCGACCGCCACTTGGGATGCGATCATCATCACACATTCGGCCTTTCGCTTCATCGCAGTCCCCTCGGCCTTTGAACAGGAAATGATCACGAAAGAGCTTCAGCTTTACGAGGATCTTCTGACCAAGGTCGACAGCGAGGACCGCGTCTCGCGCAAGCGCCTCGAGCGGCTGAAGGAAGGACTGCAGGAACGGCTCGAAGGCCTTGCCACCCGCAAGGACGATCTGCTGACGATCTCGGAGATCGGTGTCGACCAGATCGTCGTCGATGAGGCGCAGGAATTCCGTAAGCTGTCCTTCGCCACAAACATGTCGACGCTGAAGGGAATCGATCCCAATGGGTCGCAACGCGCTTGGGATCTCTATGGCAAATCCCGCTATATCGAAACGAAGAACCCGGGCCGCGCGCTGGTCCTCGCCTCCGGCACCCCGATCACCAATACGCTTGGCGAGATGTTCTCCATTCAGCGCCTCTTAGGCCATGCCGCTCTCGCCGAGCGCGGGCTGCATGAGTTCGATGCCTGGGCATCCTGCTTCGGCGATACGACGACAGAGCTCGAAATCCAGCCATCTGGCAAATACAAGCCGGTCAGCCGCTTCGCTAGCTTCGTCAACGTCCCCGAACTGATCGCCATGTTCCGCTCCTTCGCCGATGTCGTCATGCCTGACGATCTCCGGCAATATGTGAAGGTGCCCAACATCTCGACCGGGCGCCGACAGATCCTAACGGCCAAGCCGACGGCGTTGTTCAAGACCTATCAGCAAATGCTCGATGGCCGGATCAAGGCGATCGAGAAGCGTGAAGGGCCGGCAAAGCCAGGTGACGACATTCTGCTTTCGGTCATCACCGATGGTCGCCATGCCGCGATCGACCTGCGCTTAGTGATGCCGGCGGCCGAGAACGAGGCAGATAACAAGCTCAATCTCCTCGTGCGCAATGCCCACCGGATATGGACGGAGACCGGCGAGGCCATCTATCGTCGTCCTGACGGCAAGGAGTTTGATCTGCCAGGCGCCGCCCAGATGATCTTCTCGGATCTCGGCACTATTAATGTCGAGAAATCCCGCGGCTTCTCGGCCTATCGCTTCATCCGAGACGAACTGATCCAGCTTGGCGTGCCCGCAGCGCAGATCGCGTTTATGCAGGACTATAAAAAGACGGAGGCCAAGCAGCGGTTGTTTGGCGATGTCAGGGCGGGCAAGGTCCGCTTCCTGATCGGATCGTCGGAAACAATGGGCACCGGCGTTAACGCCCAGCTTCGGCTGAAGGCGCTGCACCATCTCGATGTCCCATGGCTGCCGTCGCAGATCGAACAGCGGGAAGGCCGGATCGTTAGGCAAGGCAATCAGCACGACGAGGTCGATATCTTCGCCTACGCGACCGAAGGCTCGCTCGACGCCTCCATGTGGCAGAACAACGAGCGCAAAGCCCGCTTCATCGCCGCCGCGCTCTCCGGCGACACGTCGATCCGTCGGCTGGAGGACGTTGGCGAAGGGGCCGTGAACCAGTTCGCCATGGCCAAGGCCATCGCGTCTGGCGACGAGCGCTTGATGCAGAAAGCTGGACTCGAGGCCGATATCGCCCGGCTCGAACGCCTGCGCGCCGCC
PROTEIN sequence
Length: 1362
VDFRQGWDDLGSSLETAVSKAEYSSLARCTQYAHFTPEFIIRAIWAGIARLGWRGGRVLEPGIGTGLFPALMPEIYRDAASVTGIELDPVTARIVGLLQPKARIINGDFARTDLAPIYDLAIGNPPFSDRIVRSDRAYRALGLRLHDYFIARSIDLLKPGALAAFATSHGTMDKADTKAREHIAKSADLIAAIRMPEGSFRRDAGTDVVVDILFFRKRKAGEPEGDQMWLDVDKVRPATDDEGAIRVNRWFARHPDFVLGTHALTSGPFGETYTCRPRGDDLETALAAAIELLPAYIYDGEPTPIDIDLEDELAEIVDLQPKGGLVREGSFFLDRSKGLMQMLDGAAAPVIVRKGRSGHGISEKHVRIISKLIPIRDAVREILKAQETDRPWRDLQVRLRIAWSSFVRDFGPVNHTTVSIHEDAETGEVKETHRQPNLAPFRDDPDCWLVASIEDYDLETDTAKTGPIFSERVIAPPAAPTIASPADALAVVLNERGHVDIDHIAELLHSDPADVIDELGGAIFRDPADGSWQTADGYLSGAVRTKLAAAQSAAELDPTYERNVRALTDVQPADLRPSDITARLGAPWIPASDVVAFVKEKMQADIRIHHMPELGSWTVEARQLGYTAAGTSEWGTSRRHAGDLLVDALNSRVPQIFDVFKDADGERRVLNVVDTEAARDKLQRIKQAFQDWVWADPDRTDRLARDYNDRFNNIAPRAFDGSHLRLPGASGAFTLYAHQKRGIWRIIADGATYLAHAVGAGKTMTMAAAIMEQRRLGLIAKAMLVVPGHCLAQAAREFLALYPNARILVADETNFTKDKRARFLSRAATATWDAIIITHSAFRFIAVPSAFEQEMITKELQLYEDLLTKVDSEDRVSRKRLERLKEGLQERLEGLATRKDDLLTISEIGVDQIVVDEAQEFRKLSFATNMSTLKGIDPNGSQRAWDLYGKSRYIETKNPGRALVLASGTPITNTLGEMFSIQRLLGHAALAERGLHEFDAWASCFGDTTTELEIQPSGKYKPVSRFASFVNVPELIAMFRSFADVVMPDDLRQYVKVPNISTGRRQILTAKPTALFKTYQQMLDGRIKAIEKREGPAKPGDDILLSVITDGRHAAIDLRLVMPAAENEADNKLNLLVRNAHRIWTETGEAIYRRPDGKEFDLPGAAQMIFSDLGTINVEKSRGFSAYRFIRDELIQLGVPAAQIAFMQDYKKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDEVDIFAYATEGSLDASMWQNNERKARFIAAALSGDTSIRRLEDVGEGAVNQFAMAKAIASGDERLMQKAGLEADIARLERLRAA