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SCN18_14_9_16_R1_B_scaffold_14696_1

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(1..222)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UDN2_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 117
  • Evalue 4.00e-24
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 74.0
  • Bit_score: 131
  • Evalue 3.80e-28
xerC; site-specific tyrosine recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 74.0
  • Bit_score: 117
  • Evalue 1.10e-24

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGACAGAACTTATCATCATCGCCGATCCGGCGCTCATGGCCGAGCGGCAGGGCTGGCTTGCCGGGCTTGCCGAGGAGCGCCGGCTTTCCGGCAACACGCTGGAAGCCTACGAGCGCGACACGCGCCAGTTCCTCGCCTTCCTCACCGGGCACCTCGCCGCCCCCGCCCGCCTCAAGGACATCGAGGCCCTGCGCCCGGCGGACCTACGCGGCTTCCTCGCC
PROTEIN sequence
Length: 74
MTELIIIADPALMAERQGWLAGLAEERRLSGNTLEAYERDTRQFLAFLTGHLAAPARLKDIEALRPADLRGFLA