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SCN18_14_9_16_R1_B_Rhizobiales_65_9

In projects: SCN18_14_9_16_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_14_9_16_R1_B_abawaca_094

Displaying items 1101-1150 of 1208 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R1_B_scaffold_13269
Species: Nitrobacter sp. Nb-311A (50%)
2 2102 bp 61.85 5.14 75.21
SCN18_14_9_16_R1_B_scaffold_26165
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 1052 bp 67.87 5.13 98.10
SCN18_14_9_16_R1_B_scaffold_25317
Species: Rhizobium leguminosarum (50%)
2 1082 bp 68.48 5.13 67.47
SCN18_14_9_16_R1_B_scaffold_20174
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1350 bp 61.26 5.11 70.00
SCN18_14_9_16_R1_B_scaffold_14651
Order: Rhizobiales (66.67%)
3 1885 bp 63.02 5.09 58.89
SCN18_14_9_16_R1_B_scaffold_20047
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (50%)
2 1359 bp 64.16 5.08 80.79
SCN18_14_9_16_R1_B_scaffold_20024
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
1 1360 bp 64.26 5.07 53.16
SCN18_14_9_16_R1_B_scaffold_17082
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1602 bp 57.68 5.06 63.30
SCN18_14_9_16_R1_B_scaffold_25696
Species: SCNPILOT_EXPT_1000_BF_Afipia_62_8 (50%)
2 1069 bp 64.36 5.05 56.13
SCN18_14_9_16_R1_B_scaffold_13671
Order: Rhizobiales (66.67%)
3 2029 bp 61.85 5.03 59.73
SCN18_14_9_16_R1_B_scaffold_12908
Order: Rhizobiales (66.67%)
3 3145 bp 61.08 5.01 74.50
SCN18_14_9_16_R1_B_scaffold_9209
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (50%)
4 3113 bp 60.23 5.01 98.68
SCN18_14_9_16_R1_B_scaffold_18882
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (50%)
2 1449 bp 61.21 4.97 99.17
SCN18_14_9_16_R1_B_scaffold_17734
Order: Rhizobiales (50%)
4 1543 bp 67.73 4.96 76.80
SCN18_14_9_16_R1_B_scaffold_20875
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (66.67%)
3 1303 bp 66.69 4.95 98.08
SCN18_14_9_16_R1_B_scaffold_15761
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
2 1743 bp 52.44 4.91 82.44
SCN18_14_9_16_R1_B_scaffold_19786
Order: Rhizobiales (50%)
4 1377 bp 61.80 4.90 82.79
SCN18_14_9_16_R1_B_scaffold_16828
Species: CN-SCN_Devosia_27x (100%)
1 1626 bp 55.29 4.89 99.82
SCN18_14_9_16_R1_B_scaffold_27261
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (50%)
2 1014 bp 63.71 4.88 61.54
SCN18_14_9_16_R1_B_scaffold_24594
Species: SCNPILOT_EXPT_1000_BF_Devosia_65_23 (50%)
2 1112 bp 60.16 4.86 60.43
SCN18_14_9_16_R1_B_scaffold_15298
Order: Rhizobiales (50%)
4 1796 bp 62.08 4.84 105.23
SCN18_14_9_16_R1_B_scaffold_26066
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
2 1055 bp 65.31 4.83 96.40
SCN18_14_9_16_R1_B_scaffold_25057
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 1093 bp 64.59 4.80 92.22
SCN18_14_9_16_R1_B_scaffold_25709
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1069 bp 58.65 4.77 99.91
SCN18_14_9_16_R1_B_scaffold_24878
Order: Rhizobiales (66.67%)
3 1100 bp 59.09 4.77 89.45
SCN18_14_9_16_R1_B_scaffold_20540
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 1325 bp 65.36 4.75 75.17
SCN18_14_9_16_R1_B_scaffold_26432
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 1042 bp 67.37 4.75 82.63
SCN18_14_9_16_R1_B_scaffold_12308
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (60%)
5 2887 bp 61.66 4.73 97.47
SCN18_14_9_16_R1_B_scaffold_24630
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (100%)
1 1110 bp 64.32 4.73 88.38
SCN18_14_9_16_R1_B_scaffold_26919
Order: Rhizobiales (66.67%)
3 1026 bp 65.98 4.68 85.09
SCN18_14_9_16_R1_B_scaffold_21669
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1254 bp 61.00 4.67 78.71
SCN18_14_9_16_R1_B_scaffold_21010
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
2 1294 bp 66.07 4.64 81.84
SCN18_14_9_16_R1_B_scaffold_13983
Order: Rhizobiales (60%)
5 1978 bp 61.07 4.63 96.46
SCN18_14_9_16_R1_B_scaffold_24735
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
1 1105 bp 65.88 4.62 99.91
SCN18_14_9_16_R1_B_scaffold_26414
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
1 1043 bp 55.42 4.60 99.81
SCN18_14_9_16_R1_B_scaffold_24615
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1110 bp 66.67 4.59 99.73
SCN18_14_9_16_R1_B_scaffold_25244
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 1086 bp 64.09 4.56 99.72
SCN18_14_9_16_R1_B_scaffold_20013
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (50%)
2 1361 bp 65.25 4.52 68.99
SCN18_14_9_16_R1_B_scaffold_19165
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 (50%)
2 1427 bp 62.65 4.52 65.80
SCN18_14_9_16_R1_B_scaffold_14330
Species: SCNPILOT_SOLID2_TRIM150_Afipia_61_20 (100%)
1 1931 bp 60.95 4.51 99.90
SCN18_14_9_16_R1_B_scaffold_24160
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1130 bp 65.93 4.51 92.92
SCN18_14_9_16_R1_B_scaffold_23411
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 (50%)
2 1165 bp 65.92 4.51 97.08
SCN18_14_9_16_R1_B_scaffold_21479
Order: Rhizobiales (66.67%)
3 1266 bp 65.48 4.50 71.09
SCN18_14_9_16_R1_B_scaffold_23357
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (50%)
2 1167 bp 61.61 4.50 81.23
SCN18_14_9_16_R1_B_scaffold_22575
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (50%)
2 1206 bp 64.68 4.48 100.75
SCN18_14_9_16_R1_B_scaffold_24721
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (100%)
1 1106 bp 65.73 4.48 99.82
SCN18_14_9_16_R1_B_scaffold_22417
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (100%)
1 1215 bp 59.09 4.44 100.00
SCN18_14_9_16_R1_B_scaffold_21722
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1251 bp 68.82 4.44 83.45
SCN18_14_9_16_R1_B_scaffold_18783
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 (50%)
2 1457 bp 67.19 4.43 96.36
SCN18_14_9_16_R1_B_scaffold_22210
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
1 1226 bp 65.91 4.40 99.84
Displaying items 1101-1150 of 1208 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.