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SCN18_14_9_16_R1_B_Rhizobiales_65_9

In projects: SCN18_14_9_16_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_14_9_16_R1_B_abawaca_094

Displaying items 251-300 of 1208 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R1_B_scaffold_15178
Order: Rhizobiales (100%)
3 1813 bp 68.23 6.62 91.67
SCN18_14_9_16_R1_B_scaffold_14557
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (66.67%)
3 1901 bp 62.86 6.63 95.79
SCN18_14_9_16_R1_B_scaffold_19761
Species: SCNPILOT_EXPT_1000_BF_Afipia_62_8 (100%)
1 1379 bp 65.26 6.64 99.86
SCN18_14_9_16_R1_B_scaffold_24683
Species: Shinella sp. DD12 (50%)
2 1107 bp 68.47 6.64 85.64
SCN18_14_9_16_R1_B_scaffold_17331
Species: CN-SCN_Devosia_27x (100%)
2 1579 bp 64.41 6.65 100.13
SCN18_14_9_16_R1_B_scaffold_16626
Species: Shinella sp. DD12 (50%)
4 1646 bp 61.42 6.65 98.60
SCN18_14_9_16_R1_B_scaffold_8649
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
5 3308 bp 64.03 6.67 75.18
SCN18_14_9_16_R1_B_scaffold_16912
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 1617 bp 60.85 6.68 94.99
SCN18_14_9_16_R1_B_scaffold_10818
Order: Rhizobiales (100%)
3 2626 bp 61.23 6.68 79.40
SCN18_14_9_16_R1_B_scaffold_21635
Order: Rhizobiales (50%)
4 1256 bp 55.73 6.69 85.99
SCN18_14_9_16_R1_B_scaffold_24934
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1098 bp 65.39 6.69 77.60
SCN18_14_9_16_R1_B_scaffold_10581
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (100%)
2 2687 bp 64.12 6.70 95.79
SCN18_14_9_16_R1_B_scaffold_19105
Species: CN-SCN_Mesorhizobium_20x (50%)
4 1432 bp 65.99 6.70 87.99
SCN18_14_9_16_R1_B_scaffold_19365
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
1 1411 bp 68.67 6.70 99.93
SCN18_14_9_16_R1_B_scaffold_15732
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1746 bp 66.04 6.70 89.35
SCN18_14_9_16_R1_B_scaffold_18240
Genus: Mesorhizobium (66.67%)
3 1501 bp 68.82 6.70 96.94
SCN18_14_9_16_R1_B_scaffold_8075
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
5 3532 bp 63.39 6.71 81.96
SCN18_14_9_16_R1_B_scaffold_7546
Order: Rhizobiales (60%)
5 3774 bp 65.77 6.72 88.00
SCN18_14_9_16_R1_B_scaffold_8937
Order: Rhizobiales (66.67%)
3 3211 bp 61.32 6.73 93.15
SCN18_14_9_16_R1_B_scaffold_8176
Order: Rhizobiales (57.14%)
7 5177 bp 64.30 6.75 97.06
SCN18_14_9_16_R1_B_scaffold_12942
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
3 3623 bp 61.16 6.75 87.28
SCN18_14_9_16_R1_B_scaffold_17620
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (100%)
2 1553 bp 63.68 6.76 94.66
SCN18_14_9_16_R1_B_scaffold_4073
Species: SCNPILOT_EXPT_1000_BF_Afipia_62_8 (87.5%)
8 6628 bp 65.36 6.77 99.94
SCN18_14_9_16_R1_B_scaffold_9921
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
4 2877 bp 64.03 6.78 89.57
SCN18_14_9_16_R1_B_scaffold_20184
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (50%)
2 1350 bp 60.30 6.78 81.78
SCN18_14_9_16_R1_B_scaffold_17907
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (50%)
2 1527 bp 66.86 6.78 99.02
SCN18_14_9_16_R1_B_scaffold_9029
Order: Rhizobiales (50%)
10 3179 bp 59.48 6.79 73.67
SCN18_14_9_16_R1_B_scaffold_16753
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (100%)
2 1634 bp 67.99 6.79 100.06
SCN18_14_9_16_R1_B_scaffold_16527
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
4 1657 bp 65.90 6.79 89.44
SCN18_14_9_16_R1_B_scaffold_24256
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1127 bp 68.77 6.79 100.09
SCN18_14_9_16_R1_B_scaffold_6303
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
7 5799 bp 65.41 6.80 89.71
SCN18_14_9_16_R1_B_scaffold_6895
Order: Rhizobiales (57.14%)
7 4124 bp 63.60 6.80 89.79
SCN18_14_9_16_R1_B_scaffold_1764
Genus: Devosia (54.55%)
11 12710 bp 59.65 6.80 92.53
SCN18_14_9_16_R1_B_scaffold_19299
Species: SCNPILOT_EXPT_1000_BF_Afipia_62_8 (75%)
4 1830 bp 60.27 6.80 77.54
SCN18_14_9_16_R1_B_scaffold_6824
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (66.67%)
3 4162 bp 56.34 6.81 79.94
SCN18_14_9_16_R1_B_scaffold_12292
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
3 2291 bp 68.27 6.81 78.96
SCN18_14_9_16_R1_B_scaffold_19174
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1426 bp 55.82 6.84 88.36
SCN18_14_9_16_R1_B_scaffold_4221
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
4 6445 bp 66.10 6.84 90.91
SCN18_14_9_16_R1_B_scaffold_8658
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
5 3306 bp 58.11 6.85 91.65
SCN18_14_9_16_R1_B_scaffold_18850
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (100%)
2 1968 bp 61.48 6.86 100.00
SCN18_14_9_16_R1_B_scaffold_25046
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
2 1093 bp 66.61 6.86 97.71
SCN18_14_9_16_R1_B_scaffold_8549
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
7 3344 bp 58.97 6.86 76.17
SCN18_14_9_16_R1_B_scaffold_18951
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 1443 bp 65.77 6.86 84.82
SCN18_14_9_16_R1_B_scaffold_16136
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1701 bp 65.26 6.88 91.18
SCN18_14_9_16_R1_B_scaffold_13420
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (66.67%)
3 2071 bp 68.37 6.88 93.14
SCN18_14_9_16_R1_B_scaffold_14425
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1919 bp 64.30 6.88 96.46
SCN18_14_9_16_R1_B_scaffold_13455
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 2065 bp 65.23 6.90 100.10
SCN18_14_9_16_R1_B_scaffold_5134
Order: Rhizobiales (63.64%)
11 5443 bp 60.02 6.92 87.08
SCN18_14_9_16_R1_B_scaffold_6960
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (100%)
1 4088 bp 61.74 6.93 99.95
SCN18_14_9_16_R1_B_scaffold_14817
Order: Rhizobiales (100%)
3 1862 bp 58.32 6.93 64.29
Displaying items 251-300 of 1208 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.