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SCN18_26_2_15_R2_B_scaffold_19706_2

Organism: SCN18_26_2_15_R2_B_Rhizobiales_61_8

near complete RP 47 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(507..1253)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator protein ahyR/asaR, putative n=1 Tax=Ricinus communis RepID=B9TKR4_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 230.0
  • Bit_score: 224
  • Evalue 6.00e-56
Transcriptional activator protein ahyR/asaR, putative {ECO:0000313|EMBL:EEF23550.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 230.0
  • Bit_score: 224
  • Evalue 8.40e-56
autoinducer-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 200.0
  • Bit_score: 104
  • Evalue 2.60e-20

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
TTGAGCAAGAGTCGAGATTGCAAAGAAGGCTTCGACTTTGGGGGCTGGGAGTTCGTCGATACCATCGAGGGGTGCCATGACATTGGCAGTCTCGCCGATGTCTTTTCCCAATACATTGCCGCATACGGCTACTCGGCCTCGGCCTGTGGCGCGTTCCATTCGGCCGGAGAGAATGGCGACAAGTTCGAGTTCTACTTTCGCAATTGGCCGGAGCCGTGGGCCGCCCTCTACACCCAAAGCAATTTCGCGTCCGATGACTTCACCATTTCGGAGGCACGGCGAAAGTCAGATCCCTACAGCTGGGGGACCGCAATGGCTGGCCGACAGCTCTCGCAGAAAGAGAAAGTGTTTTTGGAGGCTATGGGTGAATTCGGCTGGGCAGACGGACTGTCCATCCCGATCCACGGCCCTGGGGGACAACTGGCGTTCGTAACGATGGCCGGTTCGTCGCAACTGCTGACACCAATCGTGCGTGCGCGGCTGCAATCCTTCTCGCTCCTGACCCACGCCCGCGCACGCGCGTTGCTTCAGGTCGATCCCGAACGAGGACCGCGTGACCTGCTGACTCCTCGTGAGCTCGAATGTCTTCGCAAAGTTGGAGCAGGCAAGTCCGACCGCGCCATAGGCGAAGAACTCGGCATCGCGCGCACGACCGTCAAGTATCATCTGGAGCACGCACGTCAAAAGCTTGGCGTCCGTACACGTGCTCAGGCACTCGCGCAGTTGGTCCTATGGGGCGAAGAGTGA
PROTEIN sequence
Length: 249
LSKSRDCKEGFDFGGWEFVDTIEGCHDIGSLADVFSQYIAAYGYSASACGAFHSAGENGDKFEFYFRNWPEPWAALYTQSNFASDDFTISEARRKSDPYSWGTAMAGRQLSQKEKVFLEAMGEFGWADGLSIPIHGPGGQLAFVTMAGSSQLLTPIVRARLQSFSLLTHARARALLQVDPERGPRDLLTPRELECLRKVGAGKSDRAIGEELGIARTTVKYHLEHARQKLGVRTRAQALAQLVLWGEE*