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SCN18_30_10_14_R2_B_scaffold_4338_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1287..2051

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE9285 related cluster n=1 Tax=unknown RepID=UPI0003CE9285 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 236.0
  • Bit_score: 278
  • Evalue 6.10e-72
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:CDX14033.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 240.0
  • Bit_score: 292
  • Evalue 4.40e-76
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 232.0
  • Bit_score: 246
  • Evalue 7.30e-63

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGAAGCTTCATATATTTCGTCAGTGAAGGAAAAGGTCTCCGTTCAAGGGAAATATCTTTTCGACGGAGATAATATAGACGCTGACCCCGAGGAAGATGCCGTCTTGGAGGAGACGGCCATTGGTCCGATCGTCATTGTCGACAGGCGAGCGCTGGATAGGGAGTGTCTGGCGAGAAGCCTTCGCGAGCACAATCCTACTTTGGAGTTCCGAACCGTCGAATCGATCGACGAATTACGCCGGCTGGACGGCGCCAAGGCCACGCCTTCCGCTCTTCTGCTTATCCTCGGGAGCAGGAAAGTCACCGAGCAGGCGGCGAGGGACGAAATCGTTTCGCTGGTCTCGGGGTTCAGGAAAATTCCGGTCATCGTCATCGCCGATTCGGATGATCCGGTGCAGATACTCTCCGCGCTCGAGAGCGGAGCGCGGGGGTATATCCCGTCGAATGTGCGGCTCAAGGTGGCTGCCGAGGCAGTCGCGCTGGCGCGTGCCGGAGGCGTATTCGTTCCCGCCAGAGCCTTTCTGACATTGCGGGAAAGCATCCTGTCGACAGCAAACGGGGCGAGACCGCTTCACAGCATGTTCACGGCCAGAGAAGCGGACGTGGTGGAAGCCCTGCGCCAGGGCAAAGCCAACAAGATCATCGCCTATGAGCTCAATCTATGCGAGAGCACGGTTAAGGTGCACATCCGCAGCATCATGAGAAAGCTCAAGGCAACGAACCGCACCGAAGTCGCTTATAAACTGAGGGATGTGGTCAGCTAA
PROTEIN sequence
Length: 255
MEASYISSVKEKVSVQGKYLFDGDNIDADPEEDAVLEETAIGPIVIVDRRALDRECLARSLREHNPTLEFRTVESIDELRRLDGAKATPSALLLILGSRKVTEQAARDEIVSLVSGFRKIPVIVIADSDDPVQILSALESGARGYIPSNVRLKVAAEAVALARAGGVFVPARAFLTLRESILSTANGARPLHSMFTAREADVVEALRQGKANKIIAYELNLCESTVKVHIRSIMRKLKATNRTEVAYKLRDVVS*