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SCN18_30_10_14_R2_B_scaffold_6900_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1890..2285

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF35F3 related cluster n=1 Tax=unknown RepID=UPI0003CF35F3 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 131.0
  • Bit_score: 196
  • Evalue 1.20e-47
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX84805.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 131.0
  • Bit_score: 196
  • Evalue 2.20e-47
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 127.0
  • Bit_score: 152
  • Evalue 7.40e-35

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGGTCGCAGGGTTGATGACGTAATCGCCGCGCTTCCCGAGAATCGTCGGCAGCGTGTCGAAGCACGTTTCGCGGAGTTAAGAGGAGAGGTAGAGGGTCTCCGCGAACTGCGCCGTGCCGCAGGGAAGGCGCAGGCCGAGATCGCATCGACACTAAATATCAAACAGCCCTCGGTTTCGAAGATCGAGAAGCAGGCTGATATGTACCTGTCGACCCTCAAGAGCTACGTCGAGGCGATCGGCGGACAACTCGACCTCATCGTCCGCCTCCCTTCGCGCGCGCCACTCCGGATCGAACGGCTCGGCGACGTAGTGGGTCCGAAGATCGTCTCCGCCCGCAAAGCTGATGGCGCACCAAGCAAACCCATCCGCAAAAAGGCCGCGCGCACCGGCTGA
PROTEIN sequence
Length: 132
MGRRVDDVIAALPENRRQRVEARFAELRGEVEGLRELRRAAGKAQAEIASTLNIKQPSVSKIEKQADMYLSTLKSYVEAIGGQLDLIVRLPSRAPLRIERLGDVVGPKIVSARKADGAPSKPIRKKAARTG*