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SCN18_30_10_14_R2_B_scaffold_5833_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2933..3256)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W4S8_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 85.0
  • Bit_score: 73
  • Evalue 1.30e-10
Transcriptional regulator {ECO:0000313|EMBL:KDP73022.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 82.0
  • Bit_score: 83
  • Evalue 1.30e-13
xre; transcriptional regulator Xre similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 86.0
  • Bit_score: 59
  • Evalue 4.10e-07

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Taxonomy

CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → CN-SCN_Transposase_165x → Mobile_element

Sequences

DNA sequence
Length: 324
ATGCACCATTACGCCAAATTGTTGACATTTCCGGTCTTGCGCCCGTGTGATGGCGCGATGGAGCGAATTCCTGAGGTTATGGCACTTCTGCGCGCCGCGCGGGCGCTTCTGAATTTGCATCAGGAGCAGGTGGCGGATATCGCGGGCGTCAGCCGTCAAACAATTGCCCGCATCGAGAACGAGAGCGGTACAATACCGGTAGAGACTATCGAAAAGGTCCGAAACGCCTTGGAAAAGCGTGGCGTGATGTTCCTTCCCTCTTCAGCCGAATGCGGGCCGGCCGTCGGGCTCCGAAAGAATGCCTCGCGTAGACGATCAGAATAG
PROTEIN sequence
Length: 108
MHHYAKLLTFPVLRPCDGAMERIPEVMALLRAARALLNLHQEQVADIAGVSRQTIARIENESGTIPVETIEKVRNALEKRGVMFLPSSAECGPAVGLRKNASRRRSE*