ggKbase home page

SCN18_30_10_14_R2_B_scaffold_5861_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2..775)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEAF5A related cluster n=1 Tax=unknown RepID=UPI0003CEAF5A similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 260.0
  • Bit_score: 448
  • Evalue 4.50e-123
Multidrug transporter MatE {ECO:0000313|EMBL:ESZ42321.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 260.0
  • Bit_score: 448
  • Evalue 6.40e-123
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 258.0
  • Bit_score: 436
  • Evalue 5.10e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGAAGAGAAGCCCGGCCGCCGCGCTCACGACCTGACCAGCGGCCCGATCGCGCGCACGCTGTTGCTGTTCGCCCTCCCGGTGCTCGGCTCGAACGTGCTCCAGTCGCTGAACGGCTCGGTCAACGCGGTCTGGGTCGGTCGCTTCTTAGGCGAATCGGCGCTGACCGCGACTTCAAATGCCAACCTCGTGCTTTTCCTGCTGCTCGGCACCGTCTTCGGCATCGGCATGGCGGCCACCATCCTGGTGGCGCAGTCGGTCGGCGCGCGCGACATGCATGAGGCACGCCGCATCGTCGGCACCAGCGCCAGCTTCTTCTTCGCGGTTTCGGCGGTGTTCGCGATATGCGGCTGGATCTGGGTGGATGCCATCCTCAAGCTGCTCGGCACCCCGCCCGATGCACTGCCGCTTGCCCACGCCTATCTGCGCGTCATCTTCGTCGCCGTACCGATGATGAACCTCCTGACCTTTGTCATGACCATCCTTCGCGGCGCAGGCGATTCACGCACGCCTTTCTTCTTCATGGCCCTGGCGGTCGCCCTCGACATCGTGCTGAACCCGCTGCTCATACGCGGCATCGGGCCGTTCCCCGAACTCGGCATCGCCGGCTCGGCCACCTCGACACTGATCGGCCAGACGGTGAGCGTCGTCGCGATCATCGTACTGCTCTATGCGCGCAGGCACCCGCTCAGGCTCGCCGGCGCCGATCTCGCTTTGCTGCGCCCCGCCCCCAAGCTTTTGCGCAGCGTCGTGTTCAAGGGCGTTCCGATGGGC
PROTEIN sequence
Length: 258
MEEKPGRRAHDLTSGPIARTLLLFALPVLGSNVLQSLNGSVNAVWVGRFLGESALTATSNANLVLFLLLGTVFGIGMAATILVAQSVGARDMHEARRIVGTSASFFFAVSAVFAICGWIWVDAILKLLGTPPDALPLAHAYLRVIFVAVPMMNLLTFVMTILRGAGDSRTPFFFMALAVALDIVLNPLLIRGIGPFPELGIAGSATSTLIGQTVSVVAIIVLLYARRHPLRLAGADLALLRPAPKLLRSVVFKGVPMG