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SCN18_30_10_14_R2_B_scaffold_7574_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3250..4107)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2K3H6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 261.0
  • Bit_score: 241
  • Evalue 5.50e-61
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB99397.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 261.0
  • Bit_score: 241
  • Evalue 7.70e-61
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 222.0
  • Bit_score: 165
  • Evalue 1.80e-38

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGCCCGGATTTTCTGACCAGCGCCCTCATTCGACCAGGTTGCCCGCCGACAGTCTGAAGATGCTGATGGAGTCCCGGGACCCGATCGTTGGGCAAATCGCTCGGCATGAGCAAGCGATCGCGGGCCGGATGCATAGTCATCCACGAGCGCAATTGATCTGCACGATCTCTACCGCCGCCGATATCCGTGTCCAGTCGCAACGATGGACCATTAAACCCGGAGAGGCCGCATGGGTCCCTGGAGGCGTCGCGCACAGCGTGTCCGCCGGTCAGCCACCCATGTTCCAGTCCATCTACATTCGCCCCGATCTGATTACGAATCTGCAGCTTCCGGAGACGGTCGTTCCGATCTCGACCTTTCTGGGCGAGTTGATTTCACGCTTAGCCGGCCACTATCATGGGCAAGAGGACGCCACGACCTATCCACATCTTGTGCAACTGGTTCTCAGCGAGTTGCGTAATTTCGGCAAGCATCGCCTGAGCCTGCCTATGCCTTCGAACCCTCGACTTCACCGAATCTGTCAGACCCTAACGGACGACCCGGGAAACCGGCGAACACTGGCGGAATGGGCGAGCCTGACAGGCGCCAGCCGGCGTCGGCTCGAGCGCATCTTCCAGAACGAGACCGGCATGTCCTTTTCCGAGTGGCGGCAGTTGCGACGGATCCAGGCCGCCGCTCCGCTGCTCAGGGCGGGACGCCCGGTCCAGCAAGTGGCATGGACCGTCGGCTATGACAGTCCCAGCGCGTTCAGTGCCATGTTCCACAAGGTTACGGGCATTGTTCCGACCGCCTTGCGTTCTGCAGTTGCAGTGTCAGCAGTCGATGATCATGTCTTCGCGCGGGATCGCCTGACATAG
PROTEIN sequence
Length: 286
MPGFSDQRPHSTRLPADSLKMLMESRDPIVGQIARHEQAIAGRMHSHPRAQLICTISTAADIRVQSQRWTIKPGEAAWVPGGVAHSVSAGQPPMFQSIYIRPDLITNLQLPETVVPISTFLGELISRLAGHYHGQEDATTYPHLVQLVLSELRNFGKHRLSLPMPSNPRLHRICQTLTDDPGNRRTLAEWASLTGASRRRLERIFQNETGMSFSEWRQLRRIQAAAPLLRAGRPVQQVAWTVGYDSPSAFSAMFHKVTGIVPTALRSAVAVSAVDDHVFARDRLT*