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SCN18_30_10_14_R2_B_scaffold_10350_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1..243

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG8_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 77.0
  • Bit_score: 107
  • Evalue 4.50e-21
RND transporter {ECO:0000313|EMBL:KJC35410.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 109
  • Evalue 2.20e-21
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 77.0
  • Bit_score: 107
  • Evalue 1.30e-21

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ATGCGTCTCCAGAACGATGTCGTGGTGAATTCGCGCAAAGCGTTCCAGGTAGCCGAGGCCCAATTGAGCGGCGGCACCGTCAACCTGATCACTGTCCTCCAGACGGAGCAGACCCTGTTCACAGCAGAATCGACCCTGGTCCAGATCCGATTGAACCGTTTGCTGGCGGCAACCAGCCTTTTCCAGGCGCTCGGCGGCGGCTGGGACAAGCCCGTTCCCCAAACCGCAACGGCAACGCAATAA
PROTEIN sequence
Length: 81
MRLQNDVVVNSRKAFQVAEAQLSGGTVNLITVLQTEQTLFTAESTLVQIRLNRLLAATSLFQALGGGWDKPVPQTATATQ*