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SCN18_30_10_14_R2_B_scaffold_10825_7

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3730..3888)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F723A similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 52.0
  • Bit_score: 89
  • Evalue 6.30e-16
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 52.0
  • Bit_score: 89
  • Evalue 8.90e-16
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 81
  • Evalue 4.90e-14

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 159
GAAGAGGCGGCGGAAATCTGCGGCTGCGCCGTCGGCACTATAAAGAGCCGGGTGAGCCGTGGCCGCGCGCGGCTCCAGGAGTTGCTCGATATATCGGGCGAGGCCGATTACGGTCCCGATTCGATCGCCGCTCAGGTATTGGGTTCCAACGTCGCCTGA
PROTEIN sequence
Length: 53
EEAAEICGCAVGTIKSRVSRGRARLQELLDISGEADYGPDSIAAQVLGSNVA*